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MMGT1 (membrane magnesium transporter 1)

Identity

Alias_namesTMEM32
transmembrane protein 32
Alias_symbol (synonym)EMC5
Other alias
HGNC (Hugo) MMGT1
LocusID (NCBI) 93380
Atlas_Id 70350
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 135044231 and ends at 135056134 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MMGT1 (Xq26.3) / MMGT1 (Xq26.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MMGT1   28100
Cards
Entrez_Gene (NCBI)MMGT1  93380  membrane magnesium transporter 1
AliasesEMC5; TMEM32
GeneCards (Weizmann)MMGT1
Ensembl hg19 (Hinxton)ENSG00000169446 [Gene_View]  chrX:135044231-135056134 [Contig_View]  MMGT1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000169446 [Gene_View]  chrX:135044231-135056134 [Contig_View]  MMGT1 [Vega]
ICGC DataPortalENSG00000169446
TCGA cBioPortalMMGT1
AceView (NCBI)MMGT1
Genatlas (Paris)MMGT1
WikiGenes93380
SOURCE (Princeton)MMGT1
Genetics Home Reference (NIH)MMGT1
Genomic and cartography
GoldenPath hg19 (UCSC)MMGT1  -     chrX:135044231-135056134 -  Xq26.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MMGT1  -     Xq26.3   [Description]    (hg38-Dec_2013)
EnsemblMMGT1 - Xq26.3 [CytoView hg19]  MMGT1 - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBIMMGT1 [Mapview hg19]  MMGT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK295829 AK312409 AL157477 AM393753 BC033588
RefSeq transcript (Entrez)NM_173470
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011786 NW_004929446
Consensus coding sequences : CCDS (NCBI)MMGT1
Cluster EST : UnigeneHs.110702 [ NCBI ]
CGAP (NCI)Hs.110702
Alternative Splicing GalleryENSG00000169446
Gene ExpressionMMGT1 [ NCBI-GEO ]   MMGT1 [ EBI - ARRAY_EXPRESS ]   MMGT1 [ SEEK ]   MMGT1 [ MEM ]
Gene Expression Viewer (FireBrowse)MMGT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93380
GTEX Portal (Tissue expression)MMGT1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N4V1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N4V1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N4V1
Splice isoforms : SwissVarQ8N4V1
PhosPhoSitePlusQ8N4V1
Domains : Interpro (EBI)Magnesium_transport   
Domain families : Pfam (Sanger)MMgT (PF10270)   
Domain families : Pfam (NCBI)pfam10270   
Conserved Domain (NCBI)MMGT1
DMDM Disease mutations93380
Blocks (Seattle)MMGT1
SuperfamilyQ8N4V1
Human Protein AtlasENSG00000169446
Peptide AtlasQ8N4V1
HPRD06626
IPIIPI00922265   IPI00166785   
Protein Interaction databases
DIP (DOE-UCLA)Q8N4V1
IntAct (EBI)Q8N4V1
FunCoupENSG00000169446
BioGRIDMMGT1
STRING (EMBL)MMGT1
ZODIACMMGT1
Ontologies - Pathways
QuickGOQ8N4V1
Ontology : AmiGOGolgi membrane  early endosome  Golgi apparatus  magnesium ion transmembrane transporter activity  magnesium ion transport  membrane  integral component of membrane  early endosome membrane  transmembrane transport  ER membrane protein complex  
Ontology : EGO-EBIGolgi membrane  early endosome  Golgi apparatus  magnesium ion transmembrane transporter activity  magnesium ion transport  membrane  integral component of membrane  early endosome membrane  transmembrane transport  ER membrane protein complex  
NDEx NetworkMMGT1
Atlas of Cancer Signalling NetworkMMGT1
Wikipedia pathwaysMMGT1
Orthology - Evolution
OrthoDB93380
GeneTree (enSembl)ENSG00000169446
Phylogenetic Trees/Animal Genes : TreeFamMMGT1
HOVERGENQ8N4V1
HOGENOMQ8N4V1
Homologs : HomoloGeneMMGT1
Homology/Alignments : Family Browser (UCSC)MMGT1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMMGT1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MMGT1
dbVarMMGT1
ClinVarMMGT1
1000_GenomesMMGT1 
Exome Variant ServerMMGT1
ExAC (Exome Aggregation Consortium)MMGT1 (select the gene name)
Genetic variants : HAPMAP93380
Genomic Variants (DGV)MMGT1 [DGVbeta]
DECIPHER (Syndromes)X:135044231-135056134  ENSG00000169446
CONAN: Copy Number AnalysisMMGT1 
Mutations
ICGC Data PortalMMGT1 
TCGA Data PortalMMGT1 
Broad Tumor PortalMMGT1
OASIS PortalMMGT1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMMGT1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMMGT1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MMGT1
DgiDB (Drug Gene Interaction Database)MMGT1
DoCM (Curated mutations)MMGT1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MMGT1 (select a term)
intoGenMMGT1
Cancer3DMMGT1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMMGT1
Genetic Testing Registry MMGT1
NextProtQ8N4V1 [Medical]
TSGene93380
GENETestsMMGT1
Huge Navigator MMGT1 [HugePedia]
snp3D : Map Gene to Disease93380
BioCentury BCIQMMGT1
ClinGenMMGT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93380
Chemical/Pharm GKB GenePA164723074
Clinical trialMMGT1
Miscellaneous
canSAR (ICR)MMGT1 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMMGT1
EVEXMMGT1
GoPubMedMMGT1
iHOPMMGT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:33:22 CET 2017

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