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MMP2-AS1 (MMP2 antisense RNA 1)

Identity

Alias_symbol (synonym)ENST00000569037
Other alias-
HGNC (Hugo) MMP2-AS1
LocusID (NCBI) 107984884
Atlas_Id 80188
Location 16q12.2  [Link to chromosome band 16q12]
Location_base_pair Starts at 55426797 and ends at 55462297 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MMP2-AS1   53142
Cards
Entrez_Gene (NCBI)MMP2-AS1  107984884  MMP2 antisense RNA 1
Aliases
GeneCards (Weizmann)MMP2-AS1
Ensembl hg19 (Hinxton)ENSG00000260135 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260135 [Gene_View]  chr16:55426797-55462297 [Contig_View]  MMP2-AS1 [Vega]
ICGC DataPortalENSG00000260135
TCGA cBioPortalMMP2-AS1
AceView (NCBI)MMP2-AS1
Genatlas (Paris)MMP2-AS1
WikiGenes107984884
SOURCE (Princeton)MMP2-AS1
Genetics Home Reference (NIH)MMP2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)MMP2-AS1  -     chr16:55426797-55462297 -  16q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MMP2-AS1  -     16q12.2   [Description]    (hg19-Feb_2009)
EnsemblMMP2-AS1 - 16q12.2 [CytoView hg19]  MMP2-AS1 - 16q12.2 [CytoView hg38]
Mapping of homologs : NCBIMMP2-AS1 [Mapview hg19]  MMP2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CA426152 DA363209
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MMP2-AS1
Cluster EST : UnigeneHs.666473 [ NCBI ]
CGAP (NCI)Hs.666473
Alternative Splicing GalleryENSG00000260135
Gene ExpressionMMP2-AS1 [ NCBI-GEO ]   MMP2-AS1 [ EBI - ARRAY_EXPRESS ]   MMP2-AS1 [ SEEK ]   MMP2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)MMP2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)107984884
GTEX Portal (Tissue expression)MMP2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MMP2-AS1
DMDM Disease mutations107984884
Blocks (Seattle)MMP2-AS1
Human Protein AtlasENSG00000260135
Protein Interaction databases
FunCoupENSG00000260135
BioGRIDMMP2-AS1
STRING (EMBL)MMP2-AS1
ZODIACMMP2-AS1
Ontologies - Pathways
Huge Navigator MMP2-AS1 [HugePedia]
snp3D : Map Gene to Disease107984884
BioCentury BCIQMMP2-AS1
ClinGenMMP2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD107984884
Clinical trialMMP2-AS1
Miscellaneous
canSAR (ICR)MMP2-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMMP2-AS1
EVEXMMP2-AS1
GoPubMedMMP2-AS1
iHOPMMP2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:30:57 CEST 2017

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