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MND1 (meiotic nuclear divisions 1)

Identity

Alias_namesmeiotic nuclear divisions 1 homolog (S. cerevisiae)
Alias_symbol (synonym)GAJ
Other alias
HGNC (Hugo) MND1
LocusID (NCBI) 84057
Atlas_Id 56399
Location 4q31.3  [Link to chromosome band 4q31]
Location_base_pair Starts at 154265801 and ends at 154336247 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
KIAA0922 (4q31.3) / MND1 (4q31.3)TRIM2 (4q31.3) / MND1 (4q31.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MND1   24839
Cards
Entrez_Gene (NCBI)MND1  84057  meiotic nuclear divisions 1
AliasesGAJ
GeneCards (Weizmann)MND1
Ensembl hg19 (Hinxton)ENSG00000121211 [Gene_View]  chr4:154265801-154336247 [Contig_View]  MND1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000121211 [Gene_View]  chr4:154265801-154336247 [Contig_View]  MND1 [Vega]
ICGC DataPortalENSG00000121211
TCGA cBioPortalMND1
AceView (NCBI)MND1
Genatlas (Paris)MND1
WikiGenes84057
SOURCE (Princeton)MND1
Genetics Home Reference (NIH)MND1
Genomic and cartography
GoldenPath hg19 (UCSC)MND1  -     chr4:154265801-154336247 +  4q31.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MND1  -     4q31.3   [Description]    (hg38-Dec_2013)
EnsemblMND1 - 4q31.3 [CytoView hg19]  MND1 - 4q31.3 [CytoView hg38]
Mapping of homologs : NCBIMND1 [Mapview hg19]  MND1 [Mapview hg38]
OMIM611422   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001253861 NM_032117
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MND1
Cluster EST : UnigeneHs.294088 [ NCBI ]
CGAP (NCI)Hs.294088
Alternative Splicing GalleryENSG00000121211
Gene ExpressionMND1 [ NCBI-GEO ]   MND1 [ EBI - ARRAY_EXPRESS ]   MND1 [ SEEK ]   MND1 [ MEM ]
Gene Expression Viewer (FireBrowse)MND1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84057
GTEX Portal (Tissue expression)MND1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BWT6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BWT6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BWT6
Splice isoforms : SwissVarQ9BWT6
PhosPhoSitePlusQ9BWT6
Domains : Interpro (EBI)Mnd1    WHTH_DNA-bd_dom   
Domain families : Pfam (Sanger)Mnd1 (PF03962)   
Domain families : Pfam (NCBI)pfam03962   
Conserved Domain (NCBI)MND1
DMDM Disease mutations84057
Blocks (Seattle)MND1
SuperfamilyQ9BWT6
Human Protein AtlasENSG00000121211
Peptide AtlasQ9BWT6
HPRD17025
IPIIPI00029810   IPI00966652   IPI00966959   IPI00968287   
Protein Interaction databases
DIP (DOE-UCLA)Q9BWT6
IntAct (EBI)Q9BWT6
FunCoupENSG00000121211
BioGRIDMND1
STRING (EMBL)MND1
ZODIACMND1
Ontologies - Pathways
QuickGOQ9BWT6
Ontology : AmiGOdouble-stranded DNA binding  nucleus  double-strand break repair  reciprocal meiotic recombination  
Ontology : EGO-EBIdouble-stranded DNA binding  nucleus  double-strand break repair  reciprocal meiotic recombination  
NDEx NetworkMND1
Atlas of Cancer Signalling NetworkMND1
Wikipedia pathwaysMND1
Orthology - Evolution
OrthoDB84057
GeneTree (enSembl)ENSG00000121211
Phylogenetic Trees/Animal Genes : TreeFamMND1
HOVERGENQ9BWT6
HOGENOMQ9BWT6
Homologs : HomoloGeneMND1
Homology/Alignments : Family Browser (UCSC)MND1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMND1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MND1
dbVarMND1
ClinVarMND1
1000_GenomesMND1 
Exome Variant ServerMND1
ExAC (Exome Aggregation Consortium)MND1 (select the gene name)
Genetic variants : HAPMAP84057
Genomic Variants (DGV)MND1 [DGVbeta]
DECIPHER (Syndromes)4:154265801-154336247  ENSG00000121211
CONAN: Copy Number AnalysisMND1 
Mutations
ICGC Data PortalMND1 
TCGA Data PortalMND1 
Broad Tumor PortalMND1
OASIS PortalMND1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMND1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMND1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MND1
DgiDB (Drug Gene Interaction Database)MND1
DoCM (Curated mutations)MND1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MND1 (select a term)
intoGenMND1
Cancer3DMND1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611422   
Orphanet
MedgenMND1
Genetic Testing Registry MND1
NextProtQ9BWT6 [Medical]
TSGene84057
GENETestsMND1
Huge Navigator MND1 [HugePedia]
snp3D : Map Gene to Disease84057
BioCentury BCIQMND1
ClinGenMND1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84057
Chemical/Pharm GKB GenePA143485544
Clinical trialMND1
Miscellaneous
canSAR (ICR)MND1 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMND1
EVEXMND1
GoPubMedMND1
iHOPMND1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:10:53 CEST 2017

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