Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MOCS1 (molybdenum cofactor synthesis 1)

Identity

Alias_symbol (synonym)MOCOD
Other aliasMIG11
MOCODA
HGNC (Hugo) MOCS1
LocusID (NCBI) 4337
Atlas_Id 70361
Location 6p21.2  [Link to chromosome band 6p21]
Location_base_pair Starts at 39904258 and ends at 39934551 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MOCS1   7190
Cards
Entrez_Gene (NCBI)MOCS1  4337  molybdenum cofactor synthesis 1
AliasesMIG11; MOCOD; MOCODA
GeneCards (Weizmann)MOCS1
Ensembl hg19 (Hinxton)ENSG00000124615 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000124615 [Gene_View]  ENSG00000124615 [Sequence]  chr6:39904258-39934551 [Contig_View]  MOCS1 [Vega]
ICGC DataPortalENSG00000124615
TCGA cBioPortalMOCS1
AceView (NCBI)MOCS1
Genatlas (Paris)MOCS1
WikiGenes4337
SOURCE (Princeton)MOCS1
Genetics Home Reference (NIH)MOCS1
Genomic and cartography
GoldenPath hg38 (UCSC)MOCS1  -     chr6:39904258-39934551 -  6p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MOCS1  -     6p21.2   [Description]    (hg19-Feb_2009)
EnsemblMOCS1 - 6p21.2 [CytoView hg19]  MOCS1 - 6p21.2 [CytoView hg38]
Mapping of homologs : NCBIMOCS1 [Mapview hg19]  MOCS1 [Mapview hg38]
OMIM252150   603707   
Gene and transcription
Genbank (Entrez)AF034374 AF034374 AF214015 AF214015 AF214022
RefSeq transcript (Entrez)NM_001075098 NM_005942 NM_005943 NM_138928
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MOCS1
Cluster EST : UnigeneHs.718492 [ NCBI ]
CGAP (NCI)Hs.718492
Alternative Splicing GalleryENSG00000124615
Gene ExpressionMOCS1 [ NCBI-GEO ]   MOCS1 [ EBI - ARRAY_EXPRESS ]   MOCS1 [ SEEK ]   MOCS1 [ MEM ]
Gene Expression Viewer (FireBrowse)MOCS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4337
GTEX Portal (Tissue expression)MOCS1
Human Protein AtlasENSG00000124615-MOCS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZB8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NZB8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NZB8
Splice isoforms : SwissVarQ9NZB8
PhosPhoSitePlusQ9NZB8
Domaine pattern : Prosite (Expaxy)MOAA_NIFB_PQQE (PS01305)   
Domains : Interpro (EBI)Aldolase_TIM    Elp3/MiaB/NifB    Mo_CF_biosynth-C    Mo_CF_biosynth-C_bac    MoaA    MoaA_NifB_PqqE_Fe-S-bd_CS    Mob_synth_C    Mopterin_CF_biosynth-C_dom    rSAM   
Domain families : Pfam (Sanger)MoaC (PF01967)    Mob_synth_C (PF06463)    Radical_SAM (PF04055)   
Domain families : Pfam (NCBI)pfam01967    pfam06463    pfam04055   
Domain families : Smart (EMBL)Elp3 (SM00729)  
Conserved Domain (NCBI)MOCS1
DMDM Disease mutations4337
Blocks (Seattle)MOCS1
SuperfamilyQ9NZB8
Human Protein Atlas [tissue]ENSG00000124615-MOCS1 [tissue]
Peptide AtlasQ9NZB8
HPRD04749
IPIIPI00289462   IPI00289463   IPI00413557   IPI00926940   IPI00180672   IPI00746947   IPI00925345   IPI00514315   IPI00513730   IPI00472985   IPI00945259   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZB8
IntAct (EBI)Q9NZB8
FunCoupENSG00000124615
BioGRIDMOCS1
STRING (EMBL)MOCS1
ZODIACMOCS1
Ontologies - Pathways
QuickGOQ9NZB8
Ontology : AmiGO###############################################################################################################################################################################################################################################################                      
Ontology : EGO-EBI###############################################################################################################################################################################################################################################################                      
NDEx NetworkMOCS1
Atlas of Cancer Signalling NetworkMOCS1
Wikipedia pathwaysMOCS1
Orthology - Evolution
OrthoDB4337
GeneTree (enSembl)ENSG00000124615
Phylogenetic Trees/Animal Genes : TreeFamMOCS1
HOVERGENQ9NZB8
HOGENOMQ9NZB8
Homologs : HomoloGeneMOCS1
Homology/Alignments : Family Browser (UCSC)MOCS1
Gene fusions - Rearrangements
Fusion : QuiverMOCS1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMOCS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MOCS1
dbVarMOCS1
ClinVarMOCS1
1000_GenomesMOCS1 
Exome Variant ServerMOCS1
ExAC (Exome Aggregation Consortium)ENSG00000124615
GNOMAD BrowserENSG00000124615
Varsome BrowserMOCS1
Genetic variants : HAPMAP4337
Genomic Variants (DGV)MOCS1 [DGVbeta]
DECIPHERMOCS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMOCS1 
Mutations
ICGC Data PortalMOCS1 
TCGA Data PortalMOCS1 
Broad Tumor PortalMOCS1
OASIS PortalMOCS1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMOCS1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMOCS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MOCS1
DgiDB (Drug Gene Interaction Database)MOCS1
DoCM (Curated mutations)MOCS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MOCS1 (select a term)
intoGenMOCS1
Cancer3DMOCS1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM252150    603707   
Orphanet21306   
DisGeNETMOCS1
MedgenMOCS1
Genetic Testing Registry MOCS1
NextProtQ9NZB8 [Medical]
TSGene4337
GENETestsMOCS1
Target ValidationMOCS1
Huge Navigator MOCS1 [HugePedia]
snp3D : Map Gene to Disease4337
BioCentury BCIQMOCS1
ClinGenMOCS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4337
Chemical/Pharm GKB GenePA30900
Clinical trialMOCS1
Miscellaneous
canSAR (ICR)MOCS1 (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMOCS1
EVEXMOCS1
GoPubMedMOCS1
iHOPMOCS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:18:09 CEST 2018

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