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MON1B (MON1 homolog B, secretory trafficking associated)

Identity

Alias_namesMON1 homolog B (yeast)
MON1 secretory trafficking family member B
Alias_symbol (synonym)SAND2
HSRG1
KIAA0872
Other aliasSRG1
HGNC (Hugo) MON1B
LocusID (NCBI) 22879
Atlas_Id 70369
Location 16q23.1  [Link to chromosome band 16q23]
Location_base_pair Starts at 77190919 and ends at 77199646 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MON1B   25020
Cards
Entrez_Gene (NCBI)MON1B  22879  MON1 homolog B, secretory trafficking associated
AliasesHSRG1; SAND2; SRG1
GeneCards (Weizmann)MON1B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:77190919-77199646 [Contig_View]  MON1B [Vega]
TCGA cBioPortalMON1B
AceView (NCBI)MON1B
Genatlas (Paris)MON1B
WikiGenes22879
SOURCE (Princeton)MON1B
Genetics Home Reference (NIH)MON1B
Genomic and cartography
GoldenPath hg38 (UCSC)MON1B  -     chr16:77190919-77199646 +  16q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MON1B  -     16q23.1   [Description]    (hg19-Feb_2009)
EnsemblMON1B - 16q23.1 [CytoView hg19]  MON1B - 16q23.1 [CytoView hg38]
Mapping of homologs : NCBIMON1B [Mapview hg19]  MON1B [Mapview hg38]
OMIM608954   
Gene and transcription
Genbank (Entrez)AB020679 AF442486 AK023374 AK023896 AK128411
RefSeq transcript (Entrez)NM_001286639 NM_001286640 NM_014940
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MON1B
Cluster EST : UnigeneHs.513743 [ NCBI ]
CGAP (NCI)Hs.513743
Gene ExpressionMON1B [ NCBI-GEO ]   MON1B [ EBI - ARRAY_EXPRESS ]   MON1B [ SEEK ]   MON1B [ MEM ]
Gene Expression Viewer (FireBrowse)MON1B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22879
GTEX Portal (Tissue expression)MON1B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7L1V2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7L1V2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7L1V2
Splice isoforms : SwissVarQ7L1V2
PhosPhoSitePlusQ7L1V2
Domains : Interpro (EBI)Mon1   
Domain families : Pfam (Sanger)Mon1 (PF03164)   
Domain families : Pfam (NCBI)pfam03164   
Conserved Domain (NCBI)MON1B
DMDM Disease mutations22879
Blocks (Seattle)MON1B
SuperfamilyQ7L1V2
Peptide AtlasQ7L1V2
HPRD12342
IPIIPI00848138   IPI01011604   IPI00910484   IPI00182275   IPI00939125   
Protein Interaction databases
DIP (DOE-UCLA)Q7L1V2
IntAct (EBI)Q7L1V2
BioGRIDMON1B
STRING (EMBL)MON1B
ZODIACMON1B
Ontologies - Pathways
QuickGOQ7L1V2
Ontology : AmiGOprotein binding  cytoplasm  endomembrane system  vesicle-mediated transport  early viral transcription  late viral transcription  
Ontology : EGO-EBIprotein binding  cytoplasm  endomembrane system  vesicle-mediated transport  early viral transcription  late viral transcription  
NDEx NetworkMON1B
Atlas of Cancer Signalling NetworkMON1B
Wikipedia pathwaysMON1B
Orthology - Evolution
OrthoDB22879
Phylogenetic Trees/Animal Genes : TreeFamMON1B
HOVERGENQ7L1V2
HOGENOMQ7L1V2
Homologs : HomoloGeneMON1B
Homology/Alignments : Family Browser (UCSC)MON1B
Gene fusions - Rearrangements
Tumor Fusion PortalMON1B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMON1B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MON1B
dbVarMON1B
ClinVarMON1B
1000_GenomesMON1B 
Exome Variant ServerMON1B
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP22879
Genomic Variants (DGV)MON1B [DGVbeta]
DECIPHERMON1B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMON1B 
Mutations
ICGC Data PortalMON1B 
TCGA Data PortalMON1B 
Broad Tumor PortalMON1B
OASIS PortalMON1B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMON1B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMON1B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MON1B
DgiDB (Drug Gene Interaction Database)MON1B
DoCM (Curated mutations)MON1B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MON1B (select a term)
intoGenMON1B
Cancer3DMON1B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608954   
Orphanet
DisGeNETMON1B
MedgenMON1B
Genetic Testing Registry MON1B
NextProtQ7L1V2 [Medical]
TSGene22879
GENETestsMON1B
Target ValidationMON1B
Huge Navigator MON1B [HugePedia]
snp3D : Map Gene to Disease22879
BioCentury BCIQMON1B
ClinGenMON1B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22879
Chemical/Pharm GKB GenePA142671341
Clinical trialMON1B
Miscellaneous
canSAR (ICR)MON1B (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMON1B
EVEXMON1B
GoPubMedMON1B
iHOPMON1B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:33:55 CET 2017

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