Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MORC1 (MORC family CW-type zinc finger 1)

Identity

Alias_namesMORC
microrchidia (mouse) homolog
microrchidia homolog (mouse)
Alias_symbol (synonym)ZCW6
CT33
Other alias
HGNC (Hugo) MORC1
LocusID (NCBI) 27136
Atlas_Id 70372
Location 3q13.13  [Link to chromosome band 3q13]
Location_base_pair Starts at 108958240 and ends at 109118146 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SPICE1 (3q13.2) / MORC1 (3q13.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MORC1   7198
Cards
Entrez_Gene (NCBI)MORC1  27136  MORC family CW-type zinc finger 1
AliasesCT33; MORC; ZCW6
GeneCards (Weizmann)MORC1
Ensembl hg19 (Hinxton)ENSG00000114487 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000114487 [Gene_View]  chr3:108958240-109118146 [Contig_View]  MORC1 [Vega]
ICGC DataPortalENSG00000114487
TCGA cBioPortalMORC1
AceView (NCBI)MORC1
Genatlas (Paris)MORC1
WikiGenes27136
SOURCE (Princeton)MORC1
Genetics Home Reference (NIH)MORC1
Genomic and cartography
GoldenPath hg38 (UCSC)MORC1  -     chr3:108958240-109118146 -  3q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MORC1  -     3q13.13   [Description]    (hg19-Feb_2009)
EnsemblMORC1 - 3q13.13 [CytoView hg19]  MORC1 - 3q13.13 [CytoView hg38]
Mapping of homologs : NCBIMORC1 [Mapview hg19]  MORC1 [Mapview hg38]
OMIM603205   
Gene and transcription
Genbank (Entrez)AF084946 AK302642 AL353955 BC028680 BC050307
RefSeq transcript (Entrez)NM_014429
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MORC1
Cluster EST : UnigeneHs.591296 [ NCBI ]
CGAP (NCI)Hs.591296
Alternative Splicing GalleryENSG00000114487
Gene ExpressionMORC1 [ NCBI-GEO ]   MORC1 [ EBI - ARRAY_EXPRESS ]   MORC1 [ SEEK ]   MORC1 [ MEM ]
Gene Expression Viewer (FireBrowse)MORC1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27136
GTEX Portal (Tissue expression)MORC1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86VD1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86VD1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86VD1
Splice isoforms : SwissVarQ86VD1
PhosPhoSitePlusQ86VD1
Domaine pattern : Prosite (Expaxy)ZF_CW (PS51050)   
Domains : Interpro (EBI)HATPase_C    Znf_CW   
Domain families : Pfam (Sanger)zf-CW (PF07496)   
Domain families : Pfam (NCBI)pfam07496   
Conserved Domain (NCBI)MORC1
DMDM Disease mutations27136
Blocks (Seattle)MORC1
SuperfamilyQ86VD1
Human Protein AtlasENSG00000114487
Peptide AtlasQ86VD1
HPRD04439
IPIIPI00004362   IPI00793583   
Protein Interaction databases
DIP (DOE-UCLA)Q86VD1
IntAct (EBI)Q86VD1
FunCoupENSG00000114487
BioGRIDMORC1
STRING (EMBL)MORC1
ZODIACMORC1
Ontologies - Pathways
QuickGOQ86VD1
Ontology : AmiGOnucleus  multicellular organism development  spermatogenesis  zinc ion binding  negative regulation of transposition  cell differentiation  regulation of gene expression, epigenetic  DNA methylation involved in gamete generation  DNA hypermethylation  negative regulation of DNA-templated transcription, initiation  
Ontology : EGO-EBInucleus  multicellular organism development  spermatogenesis  zinc ion binding  negative regulation of transposition  cell differentiation  regulation of gene expression, epigenetic  DNA methylation involved in gamete generation  DNA hypermethylation  negative regulation of DNA-templated transcription, initiation  
NDEx NetworkMORC1
Atlas of Cancer Signalling NetworkMORC1
Wikipedia pathwaysMORC1
Orthology - Evolution
OrthoDB27136
GeneTree (enSembl)ENSG00000114487
Phylogenetic Trees/Animal Genes : TreeFamMORC1
HOVERGENQ86VD1
HOGENOMQ86VD1
Homologs : HomoloGeneMORC1
Homology/Alignments : Family Browser (UCSC)MORC1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMORC1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MORC1
dbVarMORC1
ClinVarMORC1
1000_GenomesMORC1 
Exome Variant ServerMORC1
ExAC (Exome Aggregation Consortium)MORC1 (select the gene name)
Genetic variants : HAPMAP27136
Genomic Variants (DGV)MORC1 [DGVbeta]
DECIPHERMORC1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMORC1 
Mutations
ICGC Data PortalMORC1 
TCGA Data PortalMORC1 
Broad Tumor PortalMORC1
OASIS PortalMORC1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMORC1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMORC1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MORC1
DgiDB (Drug Gene Interaction Database)MORC1
DoCM (Curated mutations)MORC1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MORC1 (select a term)
intoGenMORC1
Cancer3DMORC1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603205   
Orphanet
MedgenMORC1
Genetic Testing Registry MORC1
NextProtQ86VD1 [Medical]
TSGene27136
GENETestsMORC1
Target ValidationMORC1
Huge Navigator MORC1 [HugePedia]
snp3D : Map Gene to Disease27136
BioCentury BCIQMORC1
ClinGenMORC1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD27136
Chemical/Pharm GKB GenePA30906
Clinical trialMORC1
Miscellaneous
canSAR (ICR)MORC1 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMORC1
EVEXMORC1
GoPubMedMORC1
iHOPMORC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:31:00 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.