Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MOSPD3 (motile sperm domain containing 3)

Identity

Alias_symbol (synonym)CDS3
NET30
Other alias
HGNC (Hugo) MOSPD3
LocusID (NCBI) 64598
Atlas_Id 70381
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 100612102 and ends at 100615377 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CCT7 (2p13.2) / MOSPD3 (7q22.1)MOSPD3 (7q22.1) / CCDC86 (11q12.2)MOSPD3 (7q22.1) / LMO3 (12p12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MOSPD3   25078
Cards
Entrez_Gene (NCBI)MOSPD3  64598  motile sperm domain containing 3
AliasesCDS3; NET30
GeneCards (Weizmann)MOSPD3
Ensembl hg19 (Hinxton)ENSG00000106330 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000106330 [Gene_View]  ENSG00000106330 [Sequence]  chr7:100612102-100615377 [Contig_View]  MOSPD3 [Vega]
ICGC DataPortalENSG00000106330
TCGA cBioPortalMOSPD3
AceView (NCBI)MOSPD3
Genatlas (Paris)MOSPD3
WikiGenes64598
SOURCE (Princeton)MOSPD3
Genetics Home Reference (NIH)MOSPD3
Genomic and cartography
GoldenPath hg38 (UCSC)MOSPD3  -     chr7:100612102-100615377 +  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MOSPD3  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblMOSPD3 - 7q22.1 [CytoView hg19]  MOSPD3 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBIMOSPD3 [Mapview hg19]  MOSPD3 [Mapview hg38]
OMIM609125   
Gene and transcription
Genbank (Entrez)BC005042 BC009482 BC011653 BC028475 BG164079
RefSeq transcript (Entrez)NM_001040097 NM_001040098 NM_001040099 NM_023948
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MOSPD3
Cluster EST : UnigeneHs.521086 [ NCBI ]
CGAP (NCI)Hs.521086
Alternative Splicing GalleryENSG00000106330
Gene ExpressionMOSPD3 [ NCBI-GEO ]   MOSPD3 [ EBI - ARRAY_EXPRESS ]   MOSPD3 [ SEEK ]   MOSPD3 [ MEM ]
Gene Expression Viewer (FireBrowse)MOSPD3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64598
GTEX Portal (Tissue expression)MOSPD3
Human Protein AtlasENSG00000106330-MOSPD3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75425   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75425  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75425
Splice isoforms : SwissVarO75425
PhosPhoSitePlusO75425
Domaine pattern : Prosite (Expaxy)MSP (PS50202)   
Domains : Interpro (EBI)MSP_dom    PapD-like    VAP   
Domain families : Pfam (Sanger)Motile_Sperm (PF00635)   
Domain families : Pfam (NCBI)pfam00635   
Conserved Domain (NCBI)MOSPD3
DMDM Disease mutations64598
Blocks (Seattle)MOSPD3
SuperfamilyO75425
Human Protein Atlas [tissue]ENSG00000106330-MOSPD3 [tissue]
Peptide AtlasO75425
HPRD12370
IPIIPI00028431   IPI00604514   IPI00382548   IPI00746432   IPI00946174   IPI00946004   
Protein Interaction databases
DIP (DOE-UCLA)O75425
IntAct (EBI)O75425
FunCoupENSG00000106330
BioGRIDMOSPD3
STRING (EMBL)MOSPD3
ZODIACMOSPD3
Ontologies - Pathways
QuickGOO75425
Ontology : AmiGOendoplasmic reticulum membrane  heart development  integral component of membrane  
Ontology : EGO-EBIendoplasmic reticulum membrane  heart development  integral component of membrane  
NDEx NetworkMOSPD3
Atlas of Cancer Signalling NetworkMOSPD3
Wikipedia pathwaysMOSPD3
Orthology - Evolution
OrthoDB64598
GeneTree (enSembl)ENSG00000106330
Phylogenetic Trees/Animal Genes : TreeFamMOSPD3
HOGENOMO75425
Homologs : HomoloGeneMOSPD3
Homology/Alignments : Family Browser (UCSC)MOSPD3
Gene fusions - Rearrangements
Fusion : QuiverMOSPD3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMOSPD3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MOSPD3
dbVarMOSPD3
ClinVarMOSPD3
1000_GenomesMOSPD3 
Exome Variant ServerMOSPD3
ExAC (Exome Aggregation Consortium)ENSG00000106330
GNOMAD BrowserENSG00000106330
Varsome BrowserMOSPD3
Genetic variants : HAPMAP64598
Genomic Variants (DGV)MOSPD3 [DGVbeta]
DECIPHERMOSPD3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMOSPD3 
Mutations
ICGC Data PortalMOSPD3 
TCGA Data PortalMOSPD3 
Broad Tumor PortalMOSPD3
OASIS PortalMOSPD3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMOSPD3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMOSPD3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MOSPD3
DgiDB (Drug Gene Interaction Database)MOSPD3
DoCM (Curated mutations)MOSPD3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MOSPD3 (select a term)
intoGenMOSPD3
Cancer3DMOSPD3(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609125   
Orphanet
DisGeNETMOSPD3
MedgenMOSPD3
Genetic Testing Registry MOSPD3
NextProtO75425 [Medical]
TSGene64598
GENETestsMOSPD3
Target ValidationMOSPD3
Huge Navigator MOSPD3 [HugePedia]
snp3D : Map Gene to Disease64598
BioCentury BCIQMOSPD3
ClinGenMOSPD3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64598
Chemical/Pharm GKB GenePA134865874
Clinical trialMOSPD3
Miscellaneous
canSAR (ICR)MOSPD3 (select the gene name)
DataMed IndexMOSPD3
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMOSPD3
EVEXMOSPD3
GoPubMedMOSPD3
iHOPMOSPD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Feb 14 15:48:13 CET 2019
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