Atlas of Genetics and Cytogenetics in Oncology and Haematology


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Taking over the Atlas
Dear Colleagues,
The Atlas, once more, is in great danger, and I will have to proceed to a collective economic lay-off of all the team involved in the Atlas before the begining of April 2015 (a foundation having suddenly withdrawn its commitment to support the Atlas). I ask you herein if any Scientific Society (a Society of Cytogenetics, of Clinical Genetics, of Hematology, or a Cancer Society, or any other...), any University and/or Hospital, any Charity, or any database would be interested in taking over the Atlas, in whole or in part. If taking charge of the whole lot is too big, a consortium of various actors could be the solution (I am myself trying to find partners). Could you please spread the information, contact the relevant authorities, and find partners.
Survival of the Atlas will be critically dependant upon your ability to find solutions (and urgently!).
Kind regards.
Jean-Loup Huret jlhuret@AtlasGeneticsOncology.org
Donations are also welcome
If each casual visitor gives 3 Euros or Dollars, the Atlas is saved in a week !
If each professional gives 100 Euros or Dollars once a year (now), the Atlas is saved in 2 weeks !
Don't let the Atlas imminent demise
Note: we send fiscal receipts for donations equal or above 50 Euros or Dollars

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MOV10L1 (Mov10 RISC complex RNA helicase like 1)

Identity

Other namesCHAMP
DJ402G11.8
HGNC (Hugo) MOV10L1
LocusID (NCBI) 54456
Location 22q13.33
Location_base_pair Starts at 50528435 and ends at 50600116 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MOV10L1   7201
Cards
Entrez_Gene (NCBI)MOV10L1  54456  Mov10 RISC complex RNA helicase like 1
GeneCards (Weizmann)MOV10L1
Ensembl hg19 (Hinxton)ENSG00000073146 [Gene_View]  chr22:50528435-50600116 [Contig_View]  MOV10L1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000073146 [Gene_View]  chr22:50528435-50600116 [Contig_View]  MOV10L1 [Vega]
ICGC DataPortalENSG00000073146
cBioPortalMOV10L1
AceView (NCBI)MOV10L1
Genatlas (Paris)MOV10L1
WikiGenes54456
SOURCE (Princeton)MOV10L1
Genomic and cartography
GoldenPath hg19 (UCSC)MOV10L1  -     chr22:50528435-50600116 +  22q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MOV10L1  -     22q13.33   [Description]    (hg38-Dec_2013)
EnsemblMOV10L1 - 22q13.33 [CytoView hg19]  MOV10L1 - 22q13.33 [CytoView hg38]
Mapping of homologs : NCBIMOV10L1 [Mapview hg19]  MOV10L1 [Mapview hg38]
OMIM605794   
Gene and transcription
Genbank (Entrez)AF285604 AK000033 AK090740 AK092675 AK302401
RefSeq transcript (Entrez)NM_001164104 NM_001164105 NM_001164106 NM_018995
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011526 NW_004929431
Consensus coding sequences : CCDS (NCBI)MOV10L1
Cluster EST : UnigeneHs.62880 [ NCBI ]
CGAP (NCI)Hs.62880
Alternative Splicing : Fast-db (Paris)GSHG0020133
Alternative Splicing GalleryENSG00000073146
Gene ExpressionMOV10L1 [ NCBI-GEO ]     MOV10L1 [ SEEK ]   MOV10L1 [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXT6 (Uniprot)
NextProtQ9BXT6  [Medical]
With graphics : InterProQ9BXT6
Splice isoforms : SwissVarQ9BXT6 (Swissvar)
Catalytic activity : Enzyme3.6.4.13 [ Enzyme-Expasy ]   3.6.4.133.6.4.13 [ IntEnz-EBI ]   3.6.4.13 [ BRENDA ]   3.6.4.13 [ KEGG ]   
Domains : Interpro (EBI)P-loop_NTPase   
Related proteins : CluSTrQ9BXT6
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations54456
Blocks (Seattle)Q9BXT6
Human Protein AtlasENSG00000073146
Peptide AtlasQ9BXT6
HPRD16158
IPIIPI00005638   IPI00215671   IPI00178391   IPI00395546   IPI00922100   IPI00853536   IPI00853153   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXT6
IntAct (EBI)Q9BXT6
FunCoupENSG00000073146
BioGRIDMOV10L1
IntegromeDBMOV10L1
STRING (EMBL)MOV10L1
Ontologies - Pathways
QuickGOQ9BXT6
Ontology : AmiGOmagnesium ion binding  RNA binding  ATP-dependent RNA helicase activity  ATP binding  intracellular  multicellular organismal development  germ cell development  spermatogenesis  gene expression  piRNA metabolic process  
Ontology : EGO-EBImagnesium ion binding  RNA binding  ATP-dependent RNA helicase activity  ATP binding  intracellular  multicellular organismal development  germ cell development  spermatogenesis  gene expression  piRNA metabolic process  
Protein Interaction DatabaseMOV10L1
DoCM (Curated mutations)MOV10L1
Wikipedia pathwaysMOV10L1
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerMOV10L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MOV10L1
dbVarMOV10L1
ClinVarMOV10L1
1000_GenomesMOV10L1 
Exome Variant ServerMOV10L1
SNP (GeneSNP Utah)MOV10L1
SNP : HGBaseMOV10L1
Genetic variants : HAPMAPMOV10L1
Genomic Variants (DGV)MOV10L1 [DGVbeta]
Mutations
ICGC Data PortalENSG00000073146 
Somatic Mutations in Cancer : COSMICMOV10L1 
CONAN: Copy Number AnalysisMOV10L1 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)22:50528435-50600116
Mutations and Diseases : HGMDMOV10L1
OMIM605794   
MedgenMOV10L1
NextProtQ9BXT6 [Medical]
GENETestsMOV10L1
Disease Genetic AssociationMOV10L1
Huge Navigator MOV10L1 [HugePedia]  MOV10L1 [HugeCancerGEM]
snp3D : Map Gene to Disease54456
DGIdb (Drug Gene Interaction db)MOV10L1
General knowledge
Homologs : HomoloGeneMOV10L1
Homology/Alignments : Family Browser (UCSC)MOV10L1
Phylogenetic Trees/Animal Genes : TreeFamMOV10L1
Chemical/Protein Interactions : CTD54456
Chemical/Pharm GKB GenePA30909
Clinical trialMOV10L1
Cancer Resource (Charite)ENSG00000073146
Other databases
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
CoreMineMOV10L1
GoPubMedMOV10L1
iHOPMOV10L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated02-2015Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Mar 28 16:34:30 CET 2015

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For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.