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MOV10L1 (Mov10 RISC complex RNA helicase like 1)

Identity

Other namesCHAMP
DJ402G11.8
HGNC (Hugo) MOV10L1
LocusID (NCBI) 54456
Atlas_Id 41416
Location 22q13.33  [Link to chromosome band 22q13]
Location_base_pair Starts at 50528435 and ends at 50600116 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BCR (22q11.23) / MOV10L1 (22q13.33)MOV10L1 (22q13.33) / NAV2 (11p15.1)BCR 22q11.23 / MOV10L1 22q13.33
MOV10L1 22q13.33 / NAV2 11p15.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MOV10L1   7201
Cards
Entrez_Gene (NCBI)MOV10L1  54456  Mov10 RISC complex RNA helicase like 1
AliasesCHAMP; DJ402G11.8
GeneCards (Weizmann)MOV10L1
Ensembl hg19 (Hinxton)ENSG00000073146 [Gene_View]  chr22:50528435-50600116 [Contig_View]  MOV10L1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000073146 [Gene_View]  chr22:50528435-50600116 [Contig_View]  MOV10L1 [Vega]
ICGC DataPortalENSG00000073146
TCGA cBioPortalMOV10L1
AceView (NCBI)MOV10L1
Genatlas (Paris)MOV10L1
WikiGenes54456
SOURCE (Princeton)MOV10L1
Genomic and cartography
GoldenPath hg19 (UCSC)MOV10L1  -     chr22:50528435-50600116 +  22q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MOV10L1  -     22q13.33   [Description]    (hg38-Dec_2013)
EnsemblMOV10L1 - 22q13.33 [CytoView hg19]  MOV10L1 - 22q13.33 [CytoView hg38]
Mapping of homologs : NCBIMOV10L1 [Mapview hg19]  MOV10L1 [Mapview hg38]
OMIM605794   
Gene and transcription
Genbank (Entrez)AF285604 AK000033 AK090740 AK092675 AK302401
RefSeq transcript (Entrez)NM_001164104 NM_001164105 NM_001164106 NM_018995
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011526 NW_004929431
Consensus coding sequences : CCDS (NCBI)MOV10L1
Cluster EST : UnigeneHs.62880 [ NCBI ]
CGAP (NCI)Hs.62880
Alternative Splicing GalleryENSG00000073146
Gene ExpressionMOV10L1 [ NCBI-GEO ]   MOV10L1 [ EBI - ARRAY_EXPRESS ]   MOV10L1 [ SEEK ]   MOV10L1 [ MEM ]
Gene Expression Viewer (FireBrowse)MOV10L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54456
GTEX Portal (Tissue expression)MOV10L1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXT6 (Uniprot)
NextProtQ9BXT6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXT6
Splice isoforms : SwissVarQ9BXT6 (Swissvar)
PhosPhoSitePlusQ9BXT6
Domains : Interpro (EBI)P-loop_NTPase   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations54456
Blocks (Seattle)MOV10L1
SuperfamilyQ9BXT6
Human Protein AtlasENSG00000073146
Peptide AtlasQ9BXT6
HPRD16158
IPIIPI00005638   IPI00215671   IPI00178391   IPI00395546   IPI00922100   IPI00853536   IPI00853153   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXT6
IntAct (EBI)Q9BXT6
FunCoupENSG00000073146
BioGRIDMOV10L1
STRING (EMBL)MOV10L1
ZODIACMOV10L1
Ontologies - Pathways
QuickGOQ9BXT6
Ontology : AmiGOmagnesium ion binding  RNA binding  ATP-dependent RNA helicase activity  ATP-dependent RNA helicase activity  ATP binding  intracellular  male meiosis I  multicellular organism development  germ cell development  spermatogenesis  spermatogenesis  piRNA metabolic process  DNA methylation involved in gamete generation  P granule  pi-body  
Ontology : EGO-EBImagnesium ion binding  RNA binding  ATP-dependent RNA helicase activity  ATP-dependent RNA helicase activity  ATP binding  intracellular  male meiosis I  multicellular organism development  germ cell development  spermatogenesis  spermatogenesis  piRNA metabolic process  DNA methylation involved in gamete generation  P granule  pi-body  
NDEx Network
Atlas of Cancer Signalling NetworkMOV10L1
Wikipedia pathwaysMOV10L1
Orthology - Evolution
OrthoDB54456
GeneTree (enSembl)ENSG00000073146
Phylogenetic Trees/Animal Genes : TreeFamMOV10L1
Homologs : HomoloGeneMOV10L1
Homology/Alignments : Family Browser (UCSC)MOV10L1
Gene fusions - Rearrangements
Fusion: TCGABCR 22q11.23 MOV10L1 22q13.33 BRCA
Fusion: TCGAMOV10L1 22q13.33 NAV2 11p15.1 BRCA
Polymorphisms : SNP, variants
NCBI Variation ViewerMOV10L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MOV10L1
dbVarMOV10L1
ClinVarMOV10L1
1000_GenomesMOV10L1 
Exome Variant ServerMOV10L1
ExAC (Exome Aggregation Consortium)MOV10L1 (select the gene name)
Genetic variants : HAPMAP54456
Genomic Variants (DGV)MOV10L1 [DGVbeta]
Mutations
ICGC Data PortalMOV10L1 
TCGA Data PortalMOV10L1 
Broad Tumor PortalMOV10L1
OASIS PortalMOV10L1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMOV10L1 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MOV10L1
DgiDB (Drug Gene Interaction Database)MOV10L1
DoCM (Curated mutations)MOV10L1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MOV10L1 (select a term)
intoGenMOV10L1
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)22:50528435-50600116  ENSG00000073146
CONAN: Copy Number AnalysisMOV10L1 
Mutations and Diseases : HGMDMOV10L1
OMIM605794   
MedgenMOV10L1
Genetic Testing Registry MOV10L1
NextProtQ9BXT6 [Medical]
TSGene54456
GENETestsMOV10L1
Huge Navigator MOV10L1 [HugePedia]
snp3D : Map Gene to Disease54456
BioCentury BCIQMOV10L1
ClinGenMOV10L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54456
Chemical/Pharm GKB GenePA30909
Clinical trialMOV10L1
Miscellaneous
canSAR (ICR)MOV10L1 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMOV10L1
EVEXMOV10L1
GoPubMedMOV10L1
iHOPMOV10L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 9 19:22:51 CEST 2016

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