Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MPC1L (mitochondrial pyruvate carrier 1-like)

Identity

Other alias-
HGNC (Hugo) MPC1L
LocusID (NCBI) 347411
Atlas_Id 70385
Location Xp11.4  [Link to chromosome band Xp11]
Location_base_pair Starts at 40623566 and ends at 40624139 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPC1L   44205
Cards
Entrez_Gene (NCBI)MPC1L  347411  mitochondrial pyruvate carrier 1-like
Aliases
GeneCards (Weizmann)MPC1L
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:40623566-40624139 [Contig_View]  MPC1L [Vega]
TCGA cBioPortalMPC1L
AceView (NCBI)MPC1L
Genatlas (Paris)MPC1L
WikiGenes347411
SOURCE (Princeton)MPC1L
Genetics Home Reference (NIH)MPC1L
Genomic and cartography
GoldenPath hg38 (UCSC)MPC1L  -     chrX:40623566-40624139 +  Xp11.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MPC1L  -     Xp11.4   [Description]    (hg19-Feb_2009)
EnsemblMPC1L - Xp11.4 [CytoView hg19]  MPC1L - Xp11.4 [CytoView hg38]
Mapping of homologs : NCBIMPC1L [Mapview hg19]  MPC1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA971068 DB337430
RefSeq transcript (Entrez)NM_001195522
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MPC1L
Cluster EST : UnigeneHs.128084 [ NCBI ]
CGAP (NCI)Hs.128084
Gene ExpressionMPC1L [ NCBI-GEO ]   MPC1L [ EBI - ARRAY_EXPRESS ]   MPC1L [ SEEK ]   MPC1L [ MEM ]
Gene Expression Viewer (FireBrowse)MPC1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)347411
GTEX Portal (Tissue expression)MPC1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DKB6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DKB6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DKB6
Splice isoforms : SwissVarP0DKB6
PhosPhoSitePlusP0DKB6
Domains : Interpro (EBI)MPC   
Domain families : Pfam (Sanger)MPC (PF03650)   
Domain families : Pfam (NCBI)pfam03650   
Conserved Domain (NCBI)MPC1L
DMDM Disease mutations347411
Blocks (Seattle)MPC1L
SuperfamilyP0DKB6
Peptide AtlasP0DKB6
IPIIPI00977766   
Protein Interaction databases
DIP (DOE-UCLA)P0DKB6
IntAct (EBI)P0DKB6
BioGRIDMPC1L
STRING (EMBL)MPC1L
ZODIACMPC1L
Ontologies - Pathways
QuickGOP0DKB6
Ontology : AmiGOintegral component of mitochondrial inner membrane  pyruvate transmembrane transporter activity  mitochondrial pyruvate transmembrane transport  
Ontology : EGO-EBIintegral component of mitochondrial inner membrane  pyruvate transmembrane transporter activity  mitochondrial pyruvate transmembrane transport  
NDEx NetworkMPC1L
Atlas of Cancer Signalling NetworkMPC1L
Wikipedia pathwaysMPC1L
Orthology - Evolution
OrthoDB347411
Phylogenetic Trees/Animal Genes : TreeFamMPC1L
HOVERGENP0DKB6
HOGENOMP0DKB6
Homologs : HomoloGeneMPC1L
Homology/Alignments : Family Browser (UCSC)MPC1L
Gene fusions - Rearrangements
Tumor Fusion PortalMPC1L
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPC1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPC1L
dbVarMPC1L
ClinVarMPC1L
1000_GenomesMPC1L 
Exome Variant ServerMPC1L
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP347411
Genomic Variants (DGV)MPC1L [DGVbeta]
DECIPHERMPC1L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMPC1L 
Mutations
ICGC Data PortalMPC1L 
TCGA Data PortalMPC1L 
Broad Tumor PortalMPC1L
OASIS PortalMPC1L [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMPC1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MPC1L
DgiDB (Drug Gene Interaction Database)MPC1L
DoCM (Curated mutations)MPC1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPC1L (select a term)
intoGenMPC1L
Cancer3DMPC1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETMPC1L
MedgenMPC1L
Genetic Testing Registry MPC1L
NextProtP0DKB6 [Medical]
TSGene347411
GENETestsMPC1L
Target ValidationMPC1L
Huge Navigator MPC1L [HugePedia]
snp3D : Map Gene to Disease347411
BioCentury BCIQMPC1L
ClinGenMPC1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD347411
Chemical/Pharm GKB GenePA166049117
Clinical trialMPC1L
Miscellaneous
canSAR (ICR)MPC1L (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPC1L
EVEXMPC1L
GoPubMedMPC1L
iHOPMPC1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:00:12 CET 2017

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