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MPEG1 (macrophage expressed 1)

Identity

Alias_symbol (synonym)MPG1
Other aliasMPS1
Mpg-1
HGNC (Hugo) MPEG1
LocusID (NCBI) 219972
Atlas_Id 70389
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 59208510 and ends at 59213021 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPEG1   29619
Cards
Entrez_Gene (NCBI)MPEG1  219972  macrophage expressed 1
AliasesMPG1; MPS1; Mpg-1
GeneCards (Weizmann)MPEG1
Ensembl hg19 (Hinxton)ENSG00000197629 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197629 [Gene_View]  chr11:59208510-59213021 [Contig_View]  MPEG1 [Vega]
ICGC DataPortalENSG00000197629
TCGA cBioPortalMPEG1
AceView (NCBI)MPEG1
Genatlas (Paris)MPEG1
WikiGenes219972
SOURCE (Princeton)MPEG1
Genetics Home Reference (NIH)MPEG1
Genomic and cartography
GoldenPath hg38 (UCSC)MPEG1  -     chr11:59208510-59213021 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MPEG1  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblMPEG1 - 11q12.1 [CytoView hg19]  MPEG1 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIMPEG1 [Mapview hg19]  MPEG1 [Mapview hg38]
OMIM610390   
Gene and transcription
Genbank (Entrez)AK024358 AK074166 AK095457 AK097211 AK097881
RefSeq transcript (Entrez)NM_001039396
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MPEG1
Cluster EST : UnigeneHs.744920 [ NCBI ]
CGAP (NCI)Hs.744920
Alternative Splicing GalleryENSG00000197629
Gene ExpressionMPEG1 [ NCBI-GEO ]   MPEG1 [ EBI - ARRAY_EXPRESS ]   MPEG1 [ SEEK ]   MPEG1 [ MEM ]
Gene Expression Viewer (FireBrowse)MPEG1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219972
GTEX Portal (Tissue expression)MPEG1
Human Protein AtlasENSG00000197629-MPEG1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2M385   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2M385  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2M385
Splice isoforms : SwissVarQ2M385
PhosPhoSitePlusQ2M385
Domaine pattern : Prosite (Expaxy)MACPF_2 (PS51412)   
Domains : Interpro (EBI)MACPF   
Domain families : Pfam (Sanger)MACPF (PF01823)   
Domain families : Pfam (NCBI)pfam01823   
Domain families : Smart (EMBL)MACPF (SM00457)  
Conserved Domain (NCBI)MPEG1
DMDM Disease mutations219972
Blocks (Seattle)MPEG1
SuperfamilyQ2M385
Human Protein Atlas [tissue]ENSG00000197629-MPEG1 [tissue]
Peptide AtlasQ2M385
IPIIPI00152731   IPI00910467   
Protein Interaction databases
DIP (DOE-UCLA)Q2M385
IntAct (EBI)Q2M385
FunCoupENSG00000197629
BioGRIDMPEG1
STRING (EMBL)MPEG1
ZODIACMPEG1
Ontologies - Pathways
QuickGOQ2M385
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkMPEG1
Atlas of Cancer Signalling NetworkMPEG1
Wikipedia pathwaysMPEG1
Orthology - Evolution
OrthoDB219972
GeneTree (enSembl)ENSG00000197629
Phylogenetic Trees/Animal Genes : TreeFamMPEG1
HOVERGENQ2M385
HOGENOMQ2M385
Homologs : HomoloGeneMPEG1
Homology/Alignments : Family Browser (UCSC)MPEG1
Gene fusions - Rearrangements
Fusion: Tumor Portal MPEG1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPEG1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPEG1
dbVarMPEG1
ClinVarMPEG1
1000_GenomesMPEG1 
Exome Variant ServerMPEG1
ExAC (Exome Aggregation Consortium)ENSG00000197629
GNOMAD BrowserENSG00000197629
Genetic variants : HAPMAP219972
Genomic Variants (DGV)MPEG1 [DGVbeta]
DECIPHERMPEG1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMPEG1 
Mutations
ICGC Data PortalMPEG1 
TCGA Data PortalMPEG1 
Broad Tumor PortalMPEG1
OASIS PortalMPEG1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMPEG1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMPEG1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MPEG1
DgiDB (Drug Gene Interaction Database)MPEG1
DoCM (Curated mutations)MPEG1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPEG1 (select a term)
intoGenMPEG1
Cancer3DMPEG1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610390   
Orphanet
MedgenMPEG1
Genetic Testing Registry MPEG1
NextProtQ2M385 [Medical]
TSGene219972
GENETestsMPEG1
Target ValidationMPEG1
Huge Navigator MPEG1 [HugePedia]
snp3D : Map Gene to Disease219972
BioCentury BCIQMPEG1
ClinGenMPEG1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219972
Chemical/Pharm GKB GenePA164723088
Clinical trialMPEG1
Miscellaneous
canSAR (ICR)MPEG1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPEG1
EVEXMPEG1
GoPubMedMPEG1
iHOPMPEG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Nov 9 12:17:37 CET 2017

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