Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MPHOSPH6 (M-phase phosphoprotein 6)

Identity

Alias_symbol (synonym)MPP6
Other aliasMPP
MPP-6
HGNC (Hugo) MPHOSPH6
LocusID (NCBI) 10200
Atlas_Id 70391
Location 16q23.3  [Link to chromosome band 16q23]
Location_base_pair Starts at 82181767 and ends at 82203829 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MPHOSPH6 (16q23.3) / PLXDC2 (10p12.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPHOSPH6   7214
Cards
Entrez_Gene (NCBI)MPHOSPH6  10200  M-phase phosphoprotein 6
AliasesMPP; MPP-6; MPP6
GeneCards (Weizmann)MPHOSPH6
Ensembl hg19 (Hinxton)ENSG00000135698 [Gene_View]  chr16:82181767-82203829 [Contig_View]  MPHOSPH6 [Vega]
Ensembl hg38 (Hinxton)ENSG00000135698 [Gene_View]  chr16:82181767-82203829 [Contig_View]  MPHOSPH6 [Vega]
ICGC DataPortalENSG00000135698
TCGA cBioPortalMPHOSPH6
AceView (NCBI)MPHOSPH6
Genatlas (Paris)MPHOSPH6
WikiGenes10200
SOURCE (Princeton)MPHOSPH6
Genetics Home Reference (NIH)MPHOSPH6
Genomic and cartography
GoldenPath hg19 (UCSC)MPHOSPH6  -     chr16:82181767-82203829 -  16q23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MPHOSPH6  -     16q23.3   [Description]    (hg38-Dec_2013)
EnsemblMPHOSPH6 - 16q23.3 [CytoView hg19]  MPHOSPH6 - 16q23.3 [CytoView hg38]
Mapping of homologs : NCBIMPHOSPH6 [Mapview hg19]  MPHOSPH6 [Mapview hg38]
OMIM605500   
Gene and transcription
Genbank (Entrez)AI831131 AK222667 AK314163 AW175781 BC005242
RefSeq transcript (Entrez)NM_005792
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)MPHOSPH6
Cluster EST : UnigeneHs.344400 [ NCBI ]
CGAP (NCI)Hs.344400
Alternative Splicing GalleryENSG00000135698
Gene ExpressionMPHOSPH6 [ NCBI-GEO ]   MPHOSPH6 [ EBI - ARRAY_EXPRESS ]   MPHOSPH6 [ SEEK ]   MPHOSPH6 [ MEM ]
Gene Expression Viewer (FireBrowse)MPHOSPH6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10200
GTEX Portal (Tissue expression)MPHOSPH6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ99547   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ99547  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ99547
Splice isoforms : SwissVarQ99547
PhosPhoSitePlusQ99547
Domains : Interpro (EBI)MPP6   
Domain families : Pfam (Sanger)MPP6 (PF10175)   
Domain families : Pfam (NCBI)pfam10175   
Conserved Domain (NCBI)MPHOSPH6
DMDM Disease mutations10200
Blocks (Seattle)MPHOSPH6
SuperfamilyQ99547
Human Protein AtlasENSG00000135698
Peptide AtlasQ99547
HPRD16111
IPIIPI00016074   
Protein Interaction databases
DIP (DOE-UCLA)Q99547
IntAct (EBI)Q99547
FunCoupENSG00000135698
BioGRIDMPHOSPH6
STRING (EMBL)MPHOSPH6
ZODIACMPHOSPH6
Ontologies - Pathways
QuickGOQ99547
Ontology : AmiGOnuclear exosome (RNase complex)  exosome (RNase complex)  exosome (RNase complex)  maturation of 5.8S rRNA  RNA binding  protein binding  nucleus  nucleolus  cytoplasm  
Ontology : EGO-EBInuclear exosome (RNase complex)  exosome (RNase complex)  exosome (RNase complex)  maturation of 5.8S rRNA  RNA binding  protein binding  nucleus  nucleolus  cytoplasm  
Pathways : KEGGRNA degradation   
NDEx NetworkMPHOSPH6
Atlas of Cancer Signalling NetworkMPHOSPH6
Wikipedia pathwaysMPHOSPH6
Orthology - Evolution
OrthoDB10200
GeneTree (enSembl)ENSG00000135698
Phylogenetic Trees/Animal Genes : TreeFamMPHOSPH6
HOVERGENQ99547
HOGENOMQ99547
Homologs : HomoloGeneMPHOSPH6
Homology/Alignments : Family Browser (UCSC)MPHOSPH6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPHOSPH6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPHOSPH6
dbVarMPHOSPH6
ClinVarMPHOSPH6
1000_GenomesMPHOSPH6 
Exome Variant ServerMPHOSPH6
ExAC (Exome Aggregation Consortium)MPHOSPH6 (select the gene name)
Genetic variants : HAPMAP10200
Genomic Variants (DGV)MPHOSPH6 [DGVbeta]
DECIPHER (Syndromes)16:82181767-82203829  ENSG00000135698
CONAN: Copy Number AnalysisMPHOSPH6 
Mutations
ICGC Data PortalMPHOSPH6 
TCGA Data PortalMPHOSPH6 
Broad Tumor PortalMPHOSPH6
OASIS PortalMPHOSPH6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMPHOSPH6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMPHOSPH6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MPHOSPH6
DgiDB (Drug Gene Interaction Database)MPHOSPH6
DoCM (Curated mutations)MPHOSPH6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPHOSPH6 (select a term)
intoGenMPHOSPH6
Cancer3DMPHOSPH6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605500   
Orphanet
MedgenMPHOSPH6
Genetic Testing Registry MPHOSPH6
NextProtQ99547 [Medical]
TSGene10200
GENETestsMPHOSPH6
Huge Navigator MPHOSPH6 [HugePedia]
snp3D : Map Gene to Disease10200
BioCentury BCIQMPHOSPH6
ClinGenMPHOSPH6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10200
Chemical/Pharm GKB GenePA30920
Clinical trialMPHOSPH6
Miscellaneous
canSAR (ICR)MPHOSPH6 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPHOSPH6
EVEXMPHOSPH6
GoPubMedMPHOSPH6
iHOPMPHOSPH6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:33:30 CET 2017

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