Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MPHOSPH9 (M-phase phosphoprotein 9)

Identity

Alias_symbol (synonym)MPP9
Other aliasMPP-9
HGNC (Hugo) MPHOSPH9
LocusID (NCBI) 10198
Atlas_Id 54465
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 123156396 and ends at 123233238 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ABCB9 (12q24.31) / MPHOSPH9 (12q24.31)GLTSCR1L (6p21.1) / MPHOSPH9 (12q24.31)LOC100507412 (-) / MPHOSPH9 (12q24.31)
MPHOSPH9 (12q24.31) / C6orf89 (6p21.2)MPHOSPH9 (12q24.31) / CRACR2A (12p13.32)TCF7 (5q31.1) / MPHOSPH9 (12q24.31)
VPS33A (12q24.31) / MPHOSPH9 (12q24.31)ABCB9 12q24.31 / MPHOSPH9 12q24.31KIAA0240 MPHOSPH9 12q24.31
MPHOSPH9 12q24.31 / C6orf89 6p21.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPHOSPH9   7215
Cards
Entrez_Gene (NCBI)MPHOSPH9  10198  M-phase phosphoprotein 9
AliasesMPP-9; MPP9
GeneCards (Weizmann)MPHOSPH9
Ensembl hg19 (Hinxton)ENSG00000051825 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000051825 [Gene_View]  chr12:123156396-123233238 [Contig_View]  MPHOSPH9 [Vega]
ICGC DataPortalENSG00000051825
TCGA cBioPortalMPHOSPH9
AceView (NCBI)MPHOSPH9
Genatlas (Paris)MPHOSPH9
WikiGenes10198
SOURCE (Princeton)MPHOSPH9
Genetics Home Reference (NIH)MPHOSPH9
Genomic and cartography
GoldenPath hg38 (UCSC)MPHOSPH9  -     chr12:123156396-123233238 -  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MPHOSPH9  -     12q24.31   [Description]    (hg19-Feb_2009)
EnsemblMPHOSPH9 - 12q24.31 [CytoView hg19]  MPHOSPH9 - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIMPHOSPH9 [Mapview hg19]  MPHOSPH9 [Mapview hg38]
OMIM605501   
Gene and transcription
Genbank (Entrez)AK023016 AK091181 AK096541 AL096751 BC130440
RefSeq transcript (Entrez)NM_022782
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MPHOSPH9
Cluster EST : UnigeneHs.735822 [ NCBI ]
CGAP (NCI)Hs.735822
Alternative Splicing GalleryENSG00000051825
Gene ExpressionMPHOSPH9 [ NCBI-GEO ]   MPHOSPH9 [ EBI - ARRAY_EXPRESS ]   MPHOSPH9 [ SEEK ]   MPHOSPH9 [ MEM ]
Gene Expression Viewer (FireBrowse)MPHOSPH9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10198
GTEX Portal (Tissue expression)MPHOSPH9
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ99550   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ99550  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ99550
Splice isoforms : SwissVarQ99550
PhosPhoSitePlusQ99550
Domains : Interpro (EBI)MPHOSPH9   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MPHOSPH9
DMDM Disease mutations10198
Blocks (Seattle)MPHOSPH9
SuperfamilyQ99550
Human Protein AtlasENSG00000051825
Peptide AtlasQ99550
HPRD12022
IPIIPI00914850   IPI00177967   IPI01015423   IPI01015163   IPI00871701   IPI01013782   
Protein Interaction databases
DIP (DOE-UCLA)Q99550
IntAct (EBI)Q99550
FunCoupENSG00000051825
BioGRIDMPHOSPH9
STRING (EMBL)MPHOSPH9
ZODIACMPHOSPH9
Ontologies - Pathways
QuickGOQ99550
Ontology : AmiGOGolgi membrane  Golgi apparatus  centriole  membrane  
Ontology : EGO-EBIGolgi membrane  Golgi apparatus  centriole  membrane  
NDEx NetworkMPHOSPH9
Atlas of Cancer Signalling NetworkMPHOSPH9
Wikipedia pathwaysMPHOSPH9
Orthology - Evolution
OrthoDB10198
GeneTree (enSembl)ENSG00000051825
Phylogenetic Trees/Animal Genes : TreeFamMPHOSPH9
HOVERGENQ99550
HOGENOMQ99550
Homologs : HomoloGeneMPHOSPH9
Homology/Alignments : Family Browser (UCSC)MPHOSPH9
Gene fusions - Rearrangements
Fusion : MitelmanABCB9/MPHOSPH9 [12q24.31/12q24.31]  [t(12;12)(q24;q24)]  
Fusion : MitelmanGLTSCR1L/MPHOSPH9 [6p21.1/12q24.31]  [t(6;12)(p21;q24)]  
Fusion : MitelmanMPHOSPH9/C6orf89 [12q24.31/6p21.2]  [t(6;12)(p21;q24)]  
Fusion : MitelmanMPHOSPH9/CRACR2A [12q24.31/12p13.32]  [t(12;12)(p13;q24)]  
Fusion : MitelmanVPS33A/MPHOSPH9 [12q24.31/12q24.31]  [dup(12)(q24q24)]  
Fusion: TCGAABCB9 12q24.31 MPHOSPH9 12q24.31 HNSC
Fusion: TCGAKIAA0240 MPHOSPH9 12q24.31 GBM
Fusion: TCGAMPHOSPH9 12q24.31 C6orf89 6p21.2 GBM
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPHOSPH9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPHOSPH9
dbVarMPHOSPH9
ClinVarMPHOSPH9
1000_GenomesMPHOSPH9 
Exome Variant ServerMPHOSPH9
ExAC (Exome Aggregation Consortium)MPHOSPH9 (select the gene name)
Genetic variants : HAPMAP10198
Genomic Variants (DGV)MPHOSPH9 [DGVbeta]
DECIPHERMPHOSPH9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMPHOSPH9 
Mutations
ICGC Data PortalMPHOSPH9 
TCGA Data PortalMPHOSPH9 
Broad Tumor PortalMPHOSPH9
OASIS PortalMPHOSPH9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMPHOSPH9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMPHOSPH9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MPHOSPH9
DgiDB (Drug Gene Interaction Database)MPHOSPH9
DoCM (Curated mutations)MPHOSPH9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPHOSPH9 (select a term)
intoGenMPHOSPH9
Cancer3DMPHOSPH9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605501   
Orphanet
MedgenMPHOSPH9
Genetic Testing Registry MPHOSPH9
NextProtQ99550 [Medical]
TSGene10198
GENETestsMPHOSPH9
Target ValidationMPHOSPH9
Huge Navigator MPHOSPH9 [HugePedia]
snp3D : Map Gene to Disease10198
BioCentury BCIQMPHOSPH9
ClinGenMPHOSPH9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10198
Chemical/Pharm GKB GenePA30921
Clinical trialMPHOSPH9
Miscellaneous
canSAR (ICR)MPHOSPH9 (select the gene name)
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPHOSPH9
EVEXMPHOSPH9
GoPubMedMPHOSPH9
iHOPMPHOSPH9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 14:00:37 CEST 2017

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