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MPI (mannose phosphate isomerase)

Identity

Other aliasCDG1B
PMI
PMI1
HGNC (Hugo) MPI
LocusID (NCBI) 4351
Atlas_Id 70392
Location 15q24.1  [Link to chromosome band 15q24]
Location_base_pair Starts at 74890011 and ends at 74899457 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPI   7216
Cards
Entrez_Gene (NCBI)MPI  4351  mannose phosphate isomerase
AliasesCDG1B; PMI; PMI1
GeneCards (Weizmann)MPI
Ensembl hg19 (Hinxton)ENSG00000178802 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178802 [Gene_View]  chr15:74890011-74899457 [Contig_View]  MPI [Vega]
ICGC DataPortalENSG00000178802
TCGA cBioPortalMPI
AceView (NCBI)MPI
Genatlas (Paris)MPI
WikiGenes4351
SOURCE (Princeton)MPI
Genetics Home Reference (NIH)MPI
Genomic and cartography
GoldenPath hg38 (UCSC)MPI  -     chr15:74890011-74899457 +  15q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MPI  -     15q24.1   [Description]    (hg19-Feb_2009)
EnsemblMPI - 15q24.1 [CytoView hg19]  MPI - 15q24.1 [CytoView hg38]
Mapping of homologs : NCBIMPI [Mapview hg19]  MPI [Mapview hg38]
OMIM154550   602579   
Gene and transcription
Genbank (Entrez)AF504648 AK096520 AK225149 AK292374 AK294030
RefSeq transcript (Entrez)NM_001289155 NM_001289156 NM_001289157 NM_001330372 NM_002435
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MPI
Cluster EST : UnigeneHs.75694 [ NCBI ]
CGAP (NCI)Hs.75694
Alternative Splicing GalleryENSG00000178802
Gene ExpressionMPI [ NCBI-GEO ]   MPI [ EBI - ARRAY_EXPRESS ]   MPI [ SEEK ]   MPI [ MEM ]
Gene Expression Viewer (FireBrowse)MPI [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4351
GTEX Portal (Tissue expression)MPI
Protein : pattern, domain, 3D structure
UniProt/SwissProtP34949   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP34949  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP34949
Splice isoforms : SwissVarP34949
Catalytic activity : Enzyme5.3.1.8 [ Enzyme-Expasy ]   5.3.1.85.3.1.8 [ IntEnz-EBI ]   5.3.1.8 [ BRENDA ]   5.3.1.8 [ KEGG ]   
PhosPhoSitePlusP34949
Domaine pattern : Prosite (Expaxy)PMI_I_1 (PS00965)    PMI_I_2 (PS00966)   
Domains : Interpro (EBI)Man6P_Isoase-1    Mannose-6-P_Isomerase    Pmannose_isomerase-type1_CS    RmlC-like_jellyroll    RmlC_Cupin   
Domain families : Pfam (Sanger)PMI_typeI (PF01238)   
Domain families : Pfam (NCBI)pfam01238   
Conserved Domain (NCBI)MPI
DMDM Disease mutations4351
Blocks (Seattle)MPI
SuperfamilyP34949
Human Protein AtlasENSG00000178802
Peptide AtlasP34949
HPRD01108
IPIIPI00219358   IPI00332187   IPI00748640   IPI01012309   
Protein Interaction databases
DIP (DOE-UCLA)P34949
IntAct (EBI)P34949
FunCoupENSG00000178802
BioGRIDMPI
STRING (EMBL)MPI
ZODIACMPI
Ontologies - Pathways
QuickGOP34949
Ontology : AmiGOcell wall mannoprotein biosynthetic process  mannose-6-phosphate isomerase activity  mannose-6-phosphate isomerase activity  cytoplasm  cytosol  protein glycosylation  zinc ion binding  GDP-mannose biosynthetic process  GDP-mannose biosynthetic process  GDP-mannose biosynthetic process  mannose to fructose-6-phosphate metabolic process  extracellular exosome  
Ontology : EGO-EBIcell wall mannoprotein biosynthetic process  mannose-6-phosphate isomerase activity  mannose-6-phosphate isomerase activity  cytoplasm  cytosol  protein glycosylation  zinc ion binding  GDP-mannose biosynthetic process  GDP-mannose biosynthetic process  GDP-mannose biosynthetic process  mannose to fructose-6-phosphate metabolic process  extracellular exosome  
Pathways : KEGGFructose and mannose metabolism    Amino sugar and nucleotide sugar metabolism   
NDEx NetworkMPI
Atlas of Cancer Signalling NetworkMPI
Wikipedia pathwaysMPI
Orthology - Evolution
OrthoDB4351
GeneTree (enSembl)ENSG00000178802
Phylogenetic Trees/Animal Genes : TreeFamMPI
HOVERGENP34949
HOGENOMP34949
Homologs : HomoloGeneMPI
Homology/Alignments : Family Browser (UCSC)MPI
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPI [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPI
dbVarMPI
ClinVarMPI
1000_GenomesMPI 
Exome Variant ServerMPI
ExAC (Exome Aggregation Consortium)MPI (select the gene name)
Genetic variants : HAPMAP4351
Genomic Variants (DGV)MPI [DGVbeta]
DECIPHERMPI [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMPI 
Mutations
ICGC Data PortalMPI 
TCGA Data PortalMPI 
Broad Tumor PortalMPI
OASIS PortalMPI [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMPI  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMPI
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Mendelian genes
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MPI
DgiDB (Drug Gene Interaction Database)MPI
DoCM (Curated mutations)MPI (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPI (select a term)
intoGenMPI
Cancer3DMPI(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM154550    602579   
Orphanet11345   
MedgenMPI
Genetic Testing Registry MPI
NextProtP34949 [Medical]
TSGene4351
GENETestsMPI
Target ValidationMPI
Huge Navigator MPI [HugePedia]
snp3D : Map Gene to Disease4351
BioCentury BCIQMPI
ClinGenMPI
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4351
Chemical/Pharm GKB GenePA30922
Clinical trialMPI
Miscellaneous
canSAR (ICR)MPI (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPI
EVEXMPI
GoPubMedMPI
iHOPMPI
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:03 CEST 2017

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