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MPIG6B (megakaryocyte and platelet inhibitory receptor G6b)

Identity

Alias_namesC6orf25
chromosome 6 open reading frame 25
Alias_symbol (synonym)G6b
NG31
G6b-B
Other aliasTHAMY
HGNC (Hugo) MPIG6B
LocusID (NCBI) 80739
Atlas_Id 78883
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 31723344 and ends at 31726708 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPIG6B   13937
Cards
Entrez_Gene (NCBI)MPIG6B  80739  megakaryocyte and platelet inhibitory receptor G6b
AliasesC6orf25; G6b; G6b-B; NG31; 
THAMY
GeneCards (Weizmann)MPIG6B
Ensembl hg19 (Hinxton)ENSG00000204420 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204420 [Gene_View]  ENSG00000204420 [Sequence]  chr6:31723344-31726708 [Contig_View]  MPIG6B [Vega]
ICGC DataPortalENSG00000204420
TCGA cBioPortalMPIG6B
AceView (NCBI)MPIG6B
Genatlas (Paris)MPIG6B
WikiGenes80739
SOURCE (Princeton)MPIG6B
Genetics Home Reference (NIH)MPIG6B
Genomic and cartography
GoldenPath hg38 (UCSC)MPIG6B  -     chr6:31723344-31726708 +  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MPIG6B  -     6p21.33   [Description]    (hg19-Feb_2009)
EnsemblMPIG6B - 6p21.33 [CytoView hg19]  MPIG6B - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBIMPIG6B [Mapview hg19]  MPIG6B [Mapview hg38]
OMIM606520   617441   
Gene and transcription
Genbank (Entrez)AJ292259 AJ292260 AJ292261 AJ292262 AJ292263
RefSeq transcript (Entrez)NM_025260 NM_138272 NM_138273 NM_138274 NM_138275 NM_138276 NM_138277
RefSeq genomic (Entrez)NC_000006 NC_018917 NG_029044 NT_113891 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)MPIG6B
Cluster EST : UnigeneHs.247879 [ NCBI ]
CGAP (NCI)Hs.247879
Alternative Splicing GalleryENSG00000204420
Gene ExpressionMPIG6B [ NCBI-GEO ]   MPIG6B [ EBI - ARRAY_EXPRESS ]   MPIG6B [ SEEK ]   MPIG6B [ MEM ]
Gene Expression Viewer (FireBrowse)MPIG6B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80739
GTEX Portal (Tissue expression)MPIG6B
Human Protein AtlasENSG00000204420-MPIG6B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95866   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95866  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95866
Splice isoforms : SwissVarO95866
PhosPhoSitePlusO95866
Domains : Interpro (EBI)G6B   
Domain families : Pfam (Sanger)G6B (PF15096)   
Domain families : Pfam (NCBI)pfam15096   
Conserved Domain (NCBI)MPIG6B
DMDM Disease mutations80739
Blocks (Seattle)MPIG6B
SuperfamilyO95866
Human Protein Atlas [tissue]ENSG00000204420-MPIG6B [tissue]
Peptide AtlasO95866
IPIIPI00019314   IPI00216583   IPI00059303   IPI00059301   IPI00059300   IPI00059299   IPI00107432   IPI00892515   IPI00893457   IPI00893049   IPI00922486   IPI00946654   
Protein Interaction databases
DIP (DOE-UCLA)O95866
IntAct (EBI)O95866
FunCoupENSG00000204420
BioGRIDMPIG6B
STRING (EMBL)MPIG6B
ZODIACMPIG6B
Ontologies - Pathways
QuickGOO95866
Ontology : AmiGO###############################################################################################################################################################################################################################################################                                      
Ontology : EGO-EBI###############################################################################################################################################################################################################################################################                                      
NDEx NetworkMPIG6B
Atlas of Cancer Signalling NetworkMPIG6B
Wikipedia pathwaysMPIG6B
Orthology - Evolution
OrthoDB80739
GeneTree (enSembl)ENSG00000204420
Phylogenetic Trees/Animal Genes : TreeFamMPIG6B
HOVERGENO95866
HOGENOMO95866
Homologs : HomoloGeneMPIG6B
Homology/Alignments : Family Browser (UCSC)MPIG6B
Gene fusions - Rearrangements
Fusion : QuiverMPIG6B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPIG6B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPIG6B
dbVarMPIG6B
ClinVarMPIG6B
1000_GenomesMPIG6B 
Exome Variant ServerMPIG6B
ExAC (Exome Aggregation Consortium)ENSG00000204420
GNOMAD BrowserENSG00000204420
Varsome BrowserMPIG6B
Genetic variants : HAPMAP80739
Genomic Variants (DGV)MPIG6B [DGVbeta]
DECIPHERMPIG6B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMPIG6B 
Mutations
ICGC Data PortalMPIG6B 
TCGA Data PortalMPIG6B 
Broad Tumor PortalMPIG6B
OASIS PortalMPIG6B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMPIG6B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MPIG6B
DgiDB (Drug Gene Interaction Database)MPIG6B
DoCM (Curated mutations)MPIG6B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPIG6B (select a term)
intoGenMPIG6B
Cancer3DMPIG6B(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606520    617441   
Orphanet
DisGeNETMPIG6B
MedgenMPIG6B
Genetic Testing Registry MPIG6B
NextProtO95866 [Medical]
TSGene80739
GENETestsMPIG6B
Target ValidationMPIG6B
Huge Navigator MPIG6B [HugePedia]
snp3D : Map Gene to Disease80739
BioCentury BCIQMPIG6B
ClinGenMPIG6B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80739
Chemical/Pharm GKB GenePA25926
Clinical trialMPIG6B
Miscellaneous
canSAR (ICR)MPIG6B (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPIG6B
EVEXMPIG6B
GoPubMedMPIG6B
iHOPMPIG6B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:18:17 CEST 2018

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