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MPND (MPN domain containing)

Identity

Alias_symbol (synonym)FLJ14981
Other alias-
HGNC (Hugo) MPND
LocusID (NCBI) 84954
Atlas_Id 54466
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 4343527 and ends at 4360086 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KDM4B (19p13.3) / MPND (19p13.3)MPND (19p13.3) / GUSBP10 (7p11.2)MPND (19p13.3) / HM13 (20q11.21)
MPND (19p13.3) / RAB8A (19p13.12)MPND (19p13.3) / ZNF585A (19q13.12)KDM4B 19p13.3 / MPND 19p13.3
MPND 19p13.3 / ZNF585A 19q13.12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPND   25934
Cards
Entrez_Gene (NCBI)MPND  84954  MPN domain containing
Aliases
GeneCards (Weizmann)MPND
Ensembl hg19 (Hinxton)ENSG00000008382 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000008382 [Gene_View]  chr19:4343527-4360086 [Contig_View]  MPND [Vega]
ICGC DataPortalENSG00000008382
TCGA cBioPortalMPND
AceView (NCBI)MPND
Genatlas (Paris)MPND
WikiGenes84954
SOURCE (Princeton)MPND
Genetics Home Reference (NIH)MPND
Genomic and cartography
GoldenPath hg38 (UCSC)MPND  -     chr19:4343527-4360086 +  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MPND  -     19p13.3   [Description]    (hg19-Feb_2009)
EnsemblMPND - 19p13.3 [CytoView hg19]  MPND - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBIMPND [Mapview hg19]  MPND [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI927937 AK027887 AK308468 BC032652 BE328551
RefSeq transcript (Entrez)NM_001159846 NM_001300862 NM_032868
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MPND
Cluster EST : UnigeneHs.321689 [ NCBI ]
CGAP (NCI)Hs.321689
Alternative Splicing GalleryENSG00000008382
Gene ExpressionMPND [ NCBI-GEO ]   MPND [ EBI - ARRAY_EXPRESS ]   MPND [ SEEK ]   MPND [ MEM ]
Gene Expression Viewer (FireBrowse)MPND [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84954
GTEX Portal (Tissue expression)MPND
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N594   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N594  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N594
Splice isoforms : SwissVarQ8N594
PhosPhoSitePlusQ8N594
Domains : Interpro (EBI)JAMM/MPN+_dom   
Domain families : Pfam (Sanger)JAB (PF01398)   
Domain families : Pfam (NCBI)pfam01398   
Conserved Domain (NCBI)MPND
DMDM Disease mutations84954
Blocks (Seattle)MPND
SuperfamilyQ8N594
Human Protein AtlasENSG00000008382
Peptide AtlasQ8N594
HPRD07873
IPIIPI00166825   IPI00045729   IPI00014455   
Protein Interaction databases
DIP (DOE-UCLA)Q8N594
IntAct (EBI)Q8N594
FunCoupENSG00000008382
BioGRIDMPND
STRING (EMBL)MPND
ZODIACMPND
Ontologies - Pathways
QuickGOQ8N594
Ontology : AmiGOproteolysis  peptidase activity  
Ontology : EGO-EBIproteolysis  peptidase activity  
NDEx NetworkMPND
Atlas of Cancer Signalling NetworkMPND
Wikipedia pathwaysMPND
Orthology - Evolution
OrthoDB84954
GeneTree (enSembl)ENSG00000008382
Phylogenetic Trees/Animal Genes : TreeFamMPND
HOVERGENQ8N594
HOGENOMQ8N594
Homologs : HomoloGeneMPND
Homology/Alignments : Family Browser (UCSC)MPND
Gene fusions - Rearrangements
Fusion : MitelmanKDM4B/MPND [19p13.3/19p13.3]  [t(19;19)(p13;p13)]  
Fusion : MitelmanMPND/RAB8A [19p13.3/19p13.12]  [t(19;19)(p13;p13)]  
Fusion : MitelmanMPND/ZNF585A [19p13.3/19q13.12]  [t(19;19)(p13;q13)]  
Fusion: TCGAKDM4B 19p13.3 MPND 19p13.3 OV
Fusion: TCGAMPND 19p13.3 ZNF585A 19q13.12 LUAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPND [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPND
dbVarMPND
ClinVarMPND
1000_GenomesMPND 
Exome Variant ServerMPND
ExAC (Exome Aggregation Consortium)MPND (select the gene name)
Genetic variants : HAPMAP84954
Genomic Variants (DGV)MPND [DGVbeta]
DECIPHERMPND [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMPND 
Mutations
ICGC Data PortalMPND 
TCGA Data PortalMPND 
Broad Tumor PortalMPND
OASIS PortalMPND [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMPND  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMPND
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MPND
DgiDB (Drug Gene Interaction Database)MPND
DoCM (Curated mutations)MPND (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPND (select a term)
intoGenMPND
Cancer3DMPND(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMPND
Genetic Testing Registry MPND
NextProtQ8N594 [Medical]
TSGene84954
GENETestsMPND
Target ValidationMPND
Huge Navigator MPND [HugePedia]
snp3D : Map Gene to Disease84954
BioCentury BCIQMPND
ClinGenMPND
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84954
Chemical/Pharm GKB GenePA162396091
Clinical trialMPND
Miscellaneous
canSAR (ICR)MPND (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPND
EVEXMPND
GoPubMedMPND
iHOPMPND
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed Jun 7 12:45:15 CEST 2017

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