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MPP7 (membrane palmitoylated protein 7)

Identity

Alias_namesmembrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
membrane protein, palmitoylated 7
Alias_symbol (synonym)FLJ32798
Other alias-
HGNC (Hugo) MPP7
LocusID (NCBI) 143098
Atlas_Id 70394
Location 10p12.1  [Link to chromosome band 10p12]
Location_base_pair Starts at 28050994 and ends at 28303066 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MPP7 (10p12.1) / LOC400533 ()MPP7 (10p12.1) / OPA3 (19q13.32)MPP7 (10p12.1) / RNF169 (11q13.4)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPP7   26542
Cards
Entrez_Gene (NCBI)MPP7  143098  membrane palmitoylated protein 7
Aliases
GeneCards (Weizmann)MPP7
Ensembl hg19 (Hinxton)ENSG00000150054 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000150054 [Gene_View]  chr10:28050994-28303066 [Contig_View]  MPP7 [Vega]
ICGC DataPortalENSG00000150054
TCGA cBioPortalMPP7
AceView (NCBI)MPP7
Genatlas (Paris)MPP7
WikiGenes143098
SOURCE (Princeton)MPP7
Genetics Home Reference (NIH)MPP7
Genomic and cartography
GoldenPath hg38 (UCSC)MPP7  -     chr10:28050994-28303066 -  10p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MPP7  -     10p12.1   [Description]    (hg19-Feb_2009)
EnsemblMPP7 - 10p12.1 [CytoView hg19]  MPP7 - 10p12.1 [CytoView hg38]
Mapping of homologs : NCBIMPP7 [Mapview hg19]  MPP7 [Mapview hg38]
OMIM610973   
Gene and transcription
Genbank (Entrez)AK057360 AK130972 AK301592 AK315046 AL832380
RefSeq transcript (Entrez)NM_001318170 NM_173496
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MPP7
Cluster EST : UnigeneHs.499159 [ NCBI ]
CGAP (NCI)Hs.499159
Alternative Splicing GalleryENSG00000150054
Gene ExpressionMPP7 [ NCBI-GEO ]   MPP7 [ EBI - ARRAY_EXPRESS ]   MPP7 [ SEEK ]   MPP7 [ MEM ]
Gene Expression Viewer (FireBrowse)MPP7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)143098
GTEX Portal (Tissue expression)MPP7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5T2T1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5T2T1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5T2T1
Splice isoforms : SwissVarQ5T2T1
PhosPhoSitePlusQ5T2T1
Domaine pattern : Prosite (Expaxy)GUANYLATE_KINASE_1 (PS00856)    GUANYLATE_KINASE_2 (PS50052)    L27 (PS51022)    PDZ (PS50106)    SH3 (PS50002)   
Domains : Interpro (EBI)GK/Ca_channel_bsu    Guanylate_kin-like_dom    Guanylate_kinase_CS    L27_C    L27_dom    P-loop_NTPase    PDZ    SH3_2    SH3_domain   
Domain families : Pfam (Sanger)Guanylate_kin (PF00625)    L27 (PF02828)    PDZ (PF00595)    SH3_2 (PF07653)   
Domain families : Pfam (NCBI)pfam00625    pfam02828    pfam00595    pfam07653   
Domain families : Smart (EMBL)GuKc (SM00072)  L27 (SM00569)  PDZ (SM00228)  SH3 (SM00326)  
Conserved Domain (NCBI)MPP7
DMDM Disease mutations143098
Blocks (Seattle)MPP7
PDB (SRS)3LRA    3O46   
PDB (PDBSum)3LRA    3O46   
PDB (IMB)3LRA    3O46   
PDB (RSDB)3LRA    3O46   
Structural Biology KnowledgeBase3LRA    3O46   
SCOP (Structural Classification of Proteins)3LRA    3O46   
CATH (Classification of proteins structures)3LRA    3O46   
SuperfamilyQ5T2T1
Human Protein AtlasENSG00000150054
Peptide AtlasQ5T2T1
HPRD14733
IPIIPI00217617   IPI00908837   IPI00513759   
Protein Interaction databases
DIP (DOE-UCLA)Q5T2T1
IntAct (EBI)Q5T2T1
FunCoupENSG00000150054
BioGRIDMPP7
STRING (EMBL)MPP7
ZODIACMPP7
Ontologies - Pathways
QuickGOQ5T2T1
Ontology : AmiGOprotein binding  nucleoplasm  adherens junction  bicellular tight junction  positive regulation of signal transduction  protein domain specific binding  establishment of cell polarity  cell junction  positive regulation of protein complex assembly  positive regulation of protein complex assembly  protein complex scaffold  signaling adaptor activity  signaling adaptor activity  cadherin binding  protein heterodimerization activity  bicellular tight junction assembly  protein localization to adherens junction  MPP7-DLG1-LIN7 complex  
Ontology : EGO-EBIprotein binding  nucleoplasm  adherens junction  bicellular tight junction  positive regulation of signal transduction  protein domain specific binding  establishment of cell polarity  cell junction  positive regulation of protein complex assembly  positive regulation of protein complex assembly  protein complex scaffold  signaling adaptor activity  signaling adaptor activity  cadherin binding  protein heterodimerization activity  bicellular tight junction assembly  protein localization to adherens junction  MPP7-DLG1-LIN7 complex  
NDEx NetworkMPP7
Atlas of Cancer Signalling NetworkMPP7
Wikipedia pathwaysMPP7
Orthology - Evolution
OrthoDB143098
GeneTree (enSembl)ENSG00000150054
Phylogenetic Trees/Animal Genes : TreeFamMPP7
HOVERGENQ5T2T1
HOGENOMQ5T2T1
Homologs : HomoloGeneMPP7
Homology/Alignments : Family Browser (UCSC)MPP7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPP7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPP7
dbVarMPP7
ClinVarMPP7
1000_GenomesMPP7 
Exome Variant ServerMPP7
ExAC (Exome Aggregation Consortium)MPP7 (select the gene name)
Genetic variants : HAPMAP143098
Genomic Variants (DGV)MPP7 [DGVbeta]
DECIPHERMPP7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMPP7 
Mutations
ICGC Data PortalMPP7 
TCGA Data PortalMPP7 
Broad Tumor PortalMPP7
OASIS PortalMPP7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMPP7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMPP7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MPP7
DgiDB (Drug Gene Interaction Database)MPP7
DoCM (Curated mutations)MPP7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPP7 (select a term)
intoGenMPP7
Cancer3DMPP7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610973   
Orphanet
MedgenMPP7
Genetic Testing Registry MPP7
NextProtQ5T2T1 [Medical]
TSGene143098
GENETestsMPP7
Target ValidationMPP7
Huge Navigator MPP7 [HugePedia]
snp3D : Map Gene to Disease143098
BioCentury BCIQMPP7
ClinGenMPP7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD143098
Chemical/Pharm GKB GenePA134985345
Clinical trialMPP7
Miscellaneous
canSAR (ICR)MPP7 (select the gene name)
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPP7
EVEXMPP7
GoPubMedMPP7
iHOPMPP7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:03 CEST 2017

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