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MPPED1 (metallophosphoesterase domain containing 1)

Identity

Alias_namesC22orf1
chromosome 22 open reading frame 1
Alias_symbol (synonym)239AB
FAM1A
Other alias
HGNC (Hugo) MPPED1
LocusID (NCBI) 758
Atlas_Id 70396
Location 22q13.2  [Link to chromosome band 22q13]
Location_base_pair Starts at 43412014 and ends at 43506920 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPPED1   1306
Cards
Entrez_Gene (NCBI)MPPED1  758  metallophosphoesterase domain containing 1
Aliases239AB; C22orf1; FAM1A
GeneCards (Weizmann)MPPED1
Ensembl hg19 (Hinxton)ENSG00000186732 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186732 [Gene_View]  chr22:43412014-43506920 [Contig_View]  MPPED1 [Vega]
ICGC DataPortalENSG00000186732
TCGA cBioPortalMPPED1
AceView (NCBI)MPPED1
Genatlas (Paris)MPPED1
WikiGenes758
SOURCE (Princeton)MPPED1
Genetics Home Reference (NIH)MPPED1
Genomic and cartography
GoldenPath hg38 (UCSC)MPPED1  -     chr22:43412014-43506920 +  22q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MPPED1  -     22q13.2   [Description]    (hg19-Feb_2009)
EnsemblMPPED1 - 22q13.2 [CytoView hg19]  MPPED1 - 22q13.2 [CytoView hg38]
Mapping of homologs : NCBIMPPED1 [Mapview hg19]  MPPED1 [Mapview hg38]
OMIM602112   
Gene and transcription
Genbank (Entrez)AK289774 AK290541 AK294912 AK295077 AK297276
RefSeq transcript (Entrez)NM_001044370
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MPPED1
Cluster EST : UnigeneHs.159538 [ NCBI ]
CGAP (NCI)Hs.159538
Alternative Splicing GalleryENSG00000186732
Gene ExpressionMPPED1 [ NCBI-GEO ]   MPPED1 [ EBI - ARRAY_EXPRESS ]   MPPED1 [ SEEK ]   MPPED1 [ MEM ]
Gene Expression Viewer (FireBrowse)MPPED1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)758
GTEX Portal (Tissue expression)MPPED1
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15442   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15442  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15442
Splice isoforms : SwissVarO15442
Catalytic activity : Enzyme3.1.-.- [ Enzyme-Expasy ]   3.1.-.-3.1.-.- [ IntEnz-EBI ]   3.1.-.- [ BRENDA ]   3.1.-.- [ KEGG ]   
PhosPhoSitePlusO15442
Domains : Interpro (EBI)Calcineurin-like_Pesterase    Calcineurin-like_PHP_ApaH    Metallo-depent_PP-like   
Domain families : Pfam (Sanger)Metallophos (PF00149)   
Domain families : Pfam (NCBI)pfam00149   
Conserved Domain (NCBI)MPPED1
DMDM Disease mutations758
Blocks (Seattle)MPPED1
SuperfamilyO15442
Human Protein AtlasENSG00000186732
Peptide AtlasO15442
HPRD03663
IPIIPI01015242   IPI00939209   IPI00328529   IPI01013676   IPI00888937   IPI00880091   IPI00879585   
Protein Interaction databases
DIP (DOE-UCLA)O15442
IntAct (EBI)O15442
FunCoupENSG00000186732
BioGRIDMPPED1
STRING (EMBL)MPPED1
ZODIACMPPED1
Ontologies - Pathways
QuickGOO15442
Ontology : AmiGOmolecular_function  cellular_component  biological_process  hydrolase activity  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  hydrolase activity  
NDEx NetworkMPPED1
Atlas of Cancer Signalling NetworkMPPED1
Wikipedia pathwaysMPPED1
Orthology - Evolution
OrthoDB758
GeneTree (enSembl)ENSG00000186732
Phylogenetic Trees/Animal Genes : TreeFamMPPED1
HOVERGENO15442
HOGENOMO15442
Homologs : HomoloGeneMPPED1
Homology/Alignments : Family Browser (UCSC)MPPED1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPPED1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPPED1
dbVarMPPED1
ClinVarMPPED1
1000_GenomesMPPED1 
Exome Variant ServerMPPED1
ExAC (Exome Aggregation Consortium)MPPED1 (select the gene name)
Genetic variants : HAPMAP758
Genomic Variants (DGV)MPPED1 [DGVbeta]
DECIPHERMPPED1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMPPED1 
Mutations
ICGC Data PortalMPPED1 
TCGA Data PortalMPPED1 
Broad Tumor PortalMPPED1
OASIS PortalMPPED1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMPPED1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMPPED1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MPPED1
DgiDB (Drug Gene Interaction Database)MPPED1
DoCM (Curated mutations)MPPED1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPPED1 (select a term)
intoGenMPPED1
Cancer3DMPPED1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602112   
Orphanet
MedgenMPPED1
Genetic Testing Registry MPPED1
NextProtO15442 [Medical]
TSGene758
GENETestsMPPED1
Target ValidationMPPED1
Huge Navigator MPPED1 [HugePedia]
snp3D : Map Gene to Disease758
BioCentury BCIQMPPED1
ClinGenMPPED1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD758
Chemical/Pharm GKB GenePA25880
Clinical trialMPPED1
Miscellaneous
canSAR (ICR)MPPED1 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPPED1
EVEXMPPED1
GoPubMedMPPED1
iHOPMPPED1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:04 CEST 2017

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