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MPST (mercaptopyruvate sulfurtransferase)

Identity

Alias_symbol (synonym)MST
TST2
TUM1
Other alias
HGNC (Hugo) MPST
LocusID (NCBI) 4357
Atlas_Id 70397
Location 22q12.3  [Link to chromosome band 22q12]
Location_base_pair Starts at 37019642 and ends at 37029822 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MPST (22q12.3) / WAS (Xp11.23)VAT1 (17q21.31) / MPST (22q12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPST   7223
Cards
Entrez_Gene (NCBI)MPST  4357  mercaptopyruvate sulfurtransferase
AliasesMST; TST2; TUM1
GeneCards (Weizmann)MPST
Ensembl hg19 (Hinxton)ENSG00000128309 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000128309 [Gene_View]  chr22:37019642-37029822 [Contig_View]  MPST [Vega]
ICGC DataPortalENSG00000128309
TCGA cBioPortalMPST
AceView (NCBI)MPST
Genatlas (Paris)MPST
WikiGenes4357
SOURCE (Princeton)MPST
Genetics Home Reference (NIH)MPST
Genomic and cartography
GoldenPath hg38 (UCSC)MPST  -     chr22:37019642-37029822 +  22q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MPST  -     22q12.3   [Description]    (hg19-Feb_2009)
EnsemblMPST - 22q12.3 [CytoView hg19]  MPST - 22q12.3 [CytoView hg38]
Mapping of homologs : NCBIMPST [Mapview hg19]  MPST [Mapview hg38]
OMIM602496   
Gene and transcription
Genbank (Entrez)AB208824 AK055733 AW778940 BC003508 BC009450
RefSeq transcript (Entrez)NM_001013436 NM_001013440 NM_001130517 NM_021126
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MPST
Cluster EST : UnigeneHs.248267 [ NCBI ]
CGAP (NCI)Hs.248267
Alternative Splicing GalleryENSG00000128309
Gene ExpressionMPST [ NCBI-GEO ]   MPST [ EBI - ARRAY_EXPRESS ]   MPST [ SEEK ]   MPST [ MEM ]
Gene Expression Viewer (FireBrowse)MPST [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4357
GTEX Portal (Tissue expression)MPST
Human Protein AtlasENSG00000128309-MPST [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP25325   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP25325  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP25325
Splice isoforms : SwissVarP25325
PhosPhoSitePlusP25325
Domaine pattern : Prosite (Expaxy)RHODANESE_1 (PS00380)    RHODANESE_2 (PS00683)    RHODANESE_3 (PS50206)   
Domains : Interpro (EBI)Rhodanese-like_dom    Thiosulphate_STrfase_CS   
Domain families : Pfam (Sanger)Rhodanese (PF00581)   
Domain families : Pfam (NCBI)pfam00581   
Domain families : Smart (EMBL)RHOD (SM00450)  
Conserved Domain (NCBI)MPST
DMDM Disease mutations4357
Blocks (Seattle)MPST
PDB (SRS)3OLH    4JGT   
PDB (PDBSum)3OLH    4JGT   
PDB (IMB)3OLH    4JGT   
PDB (RSDB)3OLH    4JGT   
Structural Biology KnowledgeBase3OLH    4JGT   
SCOP (Structural Classification of Proteins)3OLH    4JGT   
CATH (Classification of proteins structures)3OLH    4JGT   
SuperfamilyP25325
Human Protein Atlas [tissue]ENSG00000128309-MPST [tissue]
Peptide AtlasP25325
HPRD11896
IPIIPI00165360   IPI00746782   IPI00910977   IPI00877618   
Protein Interaction databases
DIP (DOE-UCLA)P25325
IntAct (EBI)P25325
FunCoupENSG00000128309
BioGRIDMPST
STRING (EMBL)MPST
ZODIACMPST
Ontologies - Pathways
QuickGOP25325
Ontology : AmiGOkidney development  liver development  thiosulfate sulfurtransferase activity  mitochondrion  cytosol  cyanate catabolic process  response to toxic substance  3-mercaptopyruvate sulfurtransferase activity  transsulfuration  spinal cord development  cell junction  identical protein binding  neuron projection  synapse  extracellular exosome  hydrogen sulfide biosynthetic process  
Ontology : EGO-EBIkidney development  liver development  thiosulfate sulfurtransferase activity  mitochondrion  cytosol  cyanate catabolic process  response to toxic substance  3-mercaptopyruvate sulfurtransferase activity  transsulfuration  spinal cord development  cell junction  identical protein binding  neuron projection  synapse  extracellular exosome  hydrogen sulfide biosynthetic process  
Pathways : KEGGCysteine and methionine metabolism    Sulfur metabolism    Sulfur relay system   
NDEx NetworkMPST
Atlas of Cancer Signalling NetworkMPST
Wikipedia pathwaysMPST
Orthology - Evolution
OrthoDB4357
GeneTree (enSembl)ENSG00000128309
Phylogenetic Trees/Animal Genes : TreeFamMPST
HOVERGENP25325
HOGENOMP25325
Homologs : HomoloGeneMPST
Homology/Alignments : Family Browser (UCSC)MPST
Gene fusions - Rearrangements
Tumor Fusion PortalMPST
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPST [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPST
dbVarMPST
ClinVarMPST
1000_GenomesMPST 
Exome Variant ServerMPST
ExAC (Exome Aggregation Consortium)ENSG00000128309
GNOMAD BrowserENSG00000128309
Genetic variants : HAPMAP4357
Genomic Variants (DGV)MPST [DGVbeta]
DECIPHERMPST [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMPST 
Mutations
ICGC Data PortalMPST 
TCGA Data PortalMPST 
Broad Tumor PortalMPST
OASIS PortalMPST [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMPST  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMPST
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MPST
DgiDB (Drug Gene Interaction Database)MPST
DoCM (Curated mutations)MPST (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPST (select a term)
intoGenMPST
Cancer3DMPST(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602496   
Orphanet
DisGeNETMPST
MedgenMPST
Genetic Testing Registry MPST
NextProtP25325 [Medical]
TSGene4357
GENETestsMPST
Target ValidationMPST
Huge Navigator MPST [HugePedia]
snp3D : Map Gene to Disease4357
BioCentury BCIQMPST
ClinGenMPST
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4357
Chemical/Pharm GKB GenePA30928
Clinical trialMPST
Miscellaneous
canSAR (ICR)MPST (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPST
EVEXMPST
GoPubMedMPST
iHOPMPST
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:44:05 CET 2017

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