Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MPZL3 (myelin protein zero like 3)

Identity

Other alias-
HGNC (Hugo) MPZL3
LocusID (NCBI) 196264
Atlas_Id 70403
Location 11q23.3  [Link to chromosome band 11q23]
Location_base_pair Starts at 118226690 and ends at 118252368 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MPZL3 (11q23.3) / MPZL2 (11q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MPZL3   27279
Cards
Entrez_Gene (NCBI)MPZL3  196264  myelin protein zero like 3
Aliases
GeneCards (Weizmann)MPZL3
Ensembl hg19 (Hinxton)ENSG00000160588 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160588 [Gene_View]  chr11:118226690-118252368 [Contig_View]  MPZL3 [Vega]
ICGC DataPortalENSG00000160588
TCGA cBioPortalMPZL3
AceView (NCBI)MPZL3
Genatlas (Paris)MPZL3
WikiGenes196264
SOURCE (Princeton)MPZL3
Genetics Home Reference (NIH)MPZL3
Genomic and cartography
GoldenPath hg38 (UCSC)MPZL3  -     chr11:118226690-118252368 -  11q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MPZL3  -     11q23.3   [Description]    (hg19-Feb_2009)
EnsemblMPZL3 - 11q23.3 [CytoView hg19]  MPZL3 - 11q23.3 [CytoView hg38]
Mapping of homologs : NCBIMPZL3 [Mapview hg19]  MPZL3 [Mapview hg38]
OMIM611707   
Gene and transcription
Genbank (Entrez)AK095399 AK289390 AK296951 AK304292 AK310966
RefSeq transcript (Entrez)NM_001286152 NM_198275
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MPZL3
Cluster EST : UnigeneHs.15396 [ NCBI ]
CGAP (NCI)Hs.15396
Alternative Splicing GalleryENSG00000160588
Gene ExpressionMPZL3 [ NCBI-GEO ]   MPZL3 [ EBI - ARRAY_EXPRESS ]   MPZL3 [ SEEK ]   MPZL3 [ MEM ]
Gene Expression Viewer (FireBrowse)MPZL3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)196264
GTEX Portal (Tissue expression)MPZL3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UWV2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UWV2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UWV2
Splice isoforms : SwissVarQ6UWV2
PhosPhoSitePlusQ6UWV2
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_V-set    MPZL3    Myelin_P0-rel   
Domain families : Pfam (Sanger)V-set (PF07686)   
Domain families : Pfam (NCBI)pfam07686   
Domain families : Smart (EMBL)IG (SM00409)  IGv (SM00406)  
Conserved Domain (NCBI)MPZL3
DMDM Disease mutations196264
Blocks (Seattle)MPZL3
SuperfamilyQ6UWV2
Human Protein AtlasENSG00000160588
Peptide AtlasQ6UWV2
HPRD14114
IPIIPI00375222   IPI00977142   IPI00976475   IPI00910440   
Protein Interaction databases
DIP (DOE-UCLA)Q6UWV2
IntAct (EBI)Q6UWV2
FunCoupENSG00000160588
BioGRIDMPZL3
STRING (EMBL)MPZL3
ZODIACMPZL3
Ontologies - Pathways
QuickGOQ6UWV2
Ontology : AmiGOprotein binding  cell adhesion  integral component of membrane  extracellular matrix organization  hair cycle  
Ontology : EGO-EBIprotein binding  cell adhesion  integral component of membrane  extracellular matrix organization  hair cycle  
NDEx NetworkMPZL3
Atlas of Cancer Signalling NetworkMPZL3
Wikipedia pathwaysMPZL3
Orthology - Evolution
OrthoDB196264
GeneTree (enSembl)ENSG00000160588
Phylogenetic Trees/Animal Genes : TreeFamMPZL3
HOVERGENQ6UWV2
HOGENOMQ6UWV2
Homologs : HomoloGeneMPZL3
Homology/Alignments : Family Browser (UCSC)MPZL3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMPZL3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MPZL3
dbVarMPZL3
ClinVarMPZL3
1000_GenomesMPZL3 
Exome Variant ServerMPZL3
ExAC (Exome Aggregation Consortium)MPZL3 (select the gene name)
Genetic variants : HAPMAP196264
Genomic Variants (DGV)MPZL3 [DGVbeta]
DECIPHERMPZL3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMPZL3 
Mutations
ICGC Data PortalMPZL3 
TCGA Data PortalMPZL3 
Broad Tumor PortalMPZL3
OASIS PortalMPZL3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMPZL3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMPZL3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MPZL3
DgiDB (Drug Gene Interaction Database)MPZL3
DoCM (Curated mutations)MPZL3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MPZL3 (select a term)
intoGenMPZL3
Cancer3DMPZL3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611707   
Orphanet
MedgenMPZL3
Genetic Testing Registry MPZL3
NextProtQ6UWV2 [Medical]
TSGene196264
GENETestsMPZL3
Target ValidationMPZL3
Huge Navigator MPZL3 [HugePedia]
snp3D : Map Gene to Disease196264
BioCentury BCIQMPZL3
ClinGenMPZL3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196264
Chemical/Pharm GKB GenePA162396160
Clinical trialMPZL3
Miscellaneous
canSAR (ICR)MPZL3 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMPZL3
EVEXMPZL3
GoPubMedMPZL3
iHOPMPZL3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:31:05 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.