Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MR1 (major histocompatibility complex, class I-related)

Identity

Alias (NCBI)HLALS
HGNC (Hugo) MR1
HGNC Previous nameHLALS
HGNC Previous namemajor histocompatibility complex, class I-like sequence
LocusID (NCBI) 3140
Atlas_Id 51228
Location 1q25.3  [Link to chromosome band 1q25]
Location_base_pair Starts at 181033425 and ends at 181061938 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MR1 (1q25.3) / MR1 (1q25.3)MR1 (1q25.3) / NCKAP5 (2q21.2)PRPSAP2 (17p11.2) / MR1 (1q25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MR1   4975
Cards
Entrez_Gene (NCBI)MR1    major histocompatibility complex, class I-related
AliasesHLALS
GeneCards (Weizmann)MR1
Ensembl hg19 (Hinxton)ENSG00000153029 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000153029 [Gene_View]  ENSG00000153029 [Sequence]  chr1:181033425-181061938 [Contig_View]  MR1 [Vega]
ICGC DataPortalENSG00000153029
TCGA cBioPortalMR1
AceView (NCBI)MR1
Genatlas (Paris)MR1
SOURCE (Princeton)MR1
Genetics Home Reference (NIH)MR1
Genomic and cartography
GoldenPath hg38 (UCSC)MR1  -     chr1:181033425-181061938 +  1q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MR1  -     1q25.3   [Description]    (hg19-Feb_2009)
GoldenPathMR1 - 1q25.3 [CytoView hg19]  MR1 - 1q25.3 [CytoView hg38]
ImmunoBaseENSG00000153029
genome Data Viewer NCBIMR1 [Mapview hg19]  
OMIM600764   
Gene and transcription
Genbank (Entrez)AF010446 AF010447 AF031469 AJ249778 AK056155
RefSeq transcript (Entrez)NM_001194999 NM_001195000 NM_001195035 NM_001310213 NM_001385161 NM_001385162 NM_001385163 NM_001385164 NM_001531
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MR1
Alternative Splicing GalleryENSG00000153029
Gene ExpressionMR1 [ NCBI-GEO ]   MR1 [ EBI - ARRAY_EXPRESS ]   MR1 [ SEEK ]   MR1 [ MEM ]
Gene Expression Viewer (FireBrowse)MR1 [ Firebrowse - Broad ]
GenevisibleExpression of MR1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3140
GTEX Portal (Tissue expression)MR1
Human Protein AtlasENSG00000153029-MR1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MR1
Blocks (Seattle)MR1
Human Protein Atlas [tissue]ENSG00000153029-MR1 [tissue]
HPRD09012
IPIIPI00016873   IPI00644740   IPI00025625   IPI00646616   IPI00922150   
Protein Interaction databases
BioGRIDMR1
STRING (EMBL)MR1
ZODIACMR1
Ontologies - Pathways
Litterature
PubMed57 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMR1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:34:46 CET 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.