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MRAP2 (melanocortin 2 receptor accessory protein 2)

Identity

Alias_namesC6orf117
chromosome 6 open reading frame 117
Alias_symbol (synonym)bA51G5.2
Other alias
HGNC (Hugo) MRAP2
LocusID (NCBI) 112609
Atlas_Id 70405
Location 6q14.2  [Link to chromosome band 6q14]
Location_base_pair Starts at 84033659 and ends at 84090886 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRAP2   21232
Cards
Entrez_Gene (NCBI)MRAP2  112609  melanocortin 2 receptor accessory protein 2
AliasesC6orf117; bA51G5.2
GeneCards (Weizmann)MRAP2
Ensembl hg19 (Hinxton)ENSG00000135324 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135324 [Gene_View]  ENSG00000135324 [Sequence]  chr6:84033659-84090886 [Contig_View]  MRAP2 [Vega]
ICGC DataPortalENSG00000135324
TCGA cBioPortalMRAP2
AceView (NCBI)MRAP2
Genatlas (Paris)MRAP2
WikiGenes112609
SOURCE (Princeton)MRAP2
Genetics Home Reference (NIH)MRAP2
Genomic and cartography
GoldenPath hg38 (UCSC)MRAP2  -     chr6:84033659-84090886 +  6q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRAP2  -     6q14.2   [Description]    (hg19-Feb_2009)
EnsemblMRAP2 - 6q14.2 [CytoView hg19]  MRAP2 - 6q14.2 [CytoView hg38]
Mapping of homologs : NCBIMRAP2 [Mapview hg19]  MRAP2 [Mapview hg38]
OMIM615410   615457   
Gene and transcription
Genbank (Entrez)AJ420596 AK090775 AK292736 AK307078 BC010003
RefSeq transcript (Entrez)NM_001346541 NM_001346542 NM_001346543 NM_001346544 NM_138409
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MRAP2
Cluster EST : UnigeneHs.370055 [ NCBI ]
CGAP (NCI)Hs.370055
Alternative Splicing GalleryENSG00000135324
Gene ExpressionMRAP2 [ NCBI-GEO ]   MRAP2 [ EBI - ARRAY_EXPRESS ]   MRAP2 [ SEEK ]   MRAP2 [ MEM ]
Gene Expression Viewer (FireBrowse)MRAP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)112609
GTEX Portal (Tissue expression)MRAP2
Human Protein AtlasENSG00000135324-MRAP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96G30   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96G30  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96G30
Splice isoforms : SwissVarQ96G30
PhosPhoSitePlusQ96G30
Domains : Interpro (EBI)MRAP   
Domain families : Pfam (Sanger)MRAP (PF15183)   
Domain families : Pfam (NCBI)pfam15183   
Conserved Domain (NCBI)MRAP2
DMDM Disease mutations112609
Blocks (Seattle)MRAP2
SuperfamilyQ96G30
Human Protein Atlas [tissue]ENSG00000135324-MRAP2 [tissue]
Peptide AtlasQ96G30
HPRD12843
IPIIPI00062203   
Protein Interaction databases
DIP (DOE-UCLA)Q96G30
IntAct (EBI)Q96G30
FunCoupENSG00000135324
BioGRIDMRAP2
STRING (EMBL)MRAP2
ZODIACMRAP2
Ontologies - Pathways
QuickGOQ96G30
Ontology : AmiGO###############################################################################################################################################################################################################################################################                                
Ontology : EGO-EBI###############################################################################################################################################################################################################################################################                                
NDEx NetworkMRAP2
Atlas of Cancer Signalling NetworkMRAP2
Wikipedia pathwaysMRAP2
Orthology - Evolution
OrthoDB112609
GeneTree (enSembl)ENSG00000135324
Phylogenetic Trees/Animal Genes : TreeFamMRAP2
HOVERGENQ96G30
HOGENOMQ96G30
Homologs : HomoloGeneMRAP2
Homology/Alignments : Family Browser (UCSC)MRAP2
Gene fusions - Rearrangements
Fusion : QuiverMRAP2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRAP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRAP2
dbVarMRAP2
ClinVarMRAP2
1000_GenomesMRAP2 
Exome Variant ServerMRAP2
ExAC (Exome Aggregation Consortium)ENSG00000135324
GNOMAD BrowserENSG00000135324
Varsome BrowserMRAP2
Genetic variants : HAPMAP112609
Genomic Variants (DGV)MRAP2 [DGVbeta]
DECIPHERMRAP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMRAP2 
Mutations
ICGC Data PortalMRAP2 
TCGA Data PortalMRAP2 
Broad Tumor PortalMRAP2
OASIS PortalMRAP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRAP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRAP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MRAP2
DgiDB (Drug Gene Interaction Database)MRAP2
DoCM (Curated mutations)MRAP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRAP2 (select a term)
intoGenMRAP2
Cancer3DMRAP2(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615410    615457   
Orphanet
DisGeNETMRAP2
MedgenMRAP2
Genetic Testing Registry MRAP2
NextProtQ96G30 [Medical]
TSGene112609
GENETestsMRAP2
Target ValidationMRAP2
Huge Navigator MRAP2 [HugePedia]
snp3D : Map Gene to Disease112609
BioCentury BCIQMRAP2
ClinGenMRAP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD112609
Chemical/Pharm GKB GenePA162396161
Clinical trialMRAP2
Miscellaneous
canSAR (ICR)MRAP2 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRAP2
EVEXMRAP2
GoPubMedMRAP2
iHOPMRAP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:18:20 CEST 2018

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