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MREG (melanoregulin)

Identity

Alias_symbol (synonym)FLJ10116
DSU
WDT2
Other alias
HGNC (Hugo) MREG
LocusID (NCBI) 55686
Atlas_Id 70406
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 215942591 and ends at 216013623 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TTLL4 (2q35) / MREG (2q35)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MREG   25478
Cards
Entrez_Gene (NCBI)MREG  55686  melanoregulin
AliasesDSU; WDT2
GeneCards (Weizmann)MREG
Ensembl hg19 (Hinxton)ENSG00000118242 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000118242 [Gene_View]  chr2:215942591-216013623 [Contig_View]  MREG [Vega]
ICGC DataPortalENSG00000118242
TCGA cBioPortalMREG
AceView (NCBI)MREG
Genatlas (Paris)MREG
WikiGenes55686
SOURCE (Princeton)MREG
Genetics Home Reference (NIH)MREG
Genomic and cartography
GoldenPath hg38 (UCSC)MREG  -     chr2:215942591-216013623 -  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MREG  -     2q35   [Description]    (hg19-Feb_2009)
EnsemblMREG - 2q35 [CytoView hg19]  MREG - 2q35 [CytoView hg38]
Mapping of homologs : NCBIMREG [Mapview hg19]  MREG [Mapview hg38]
OMIM609207   
Gene and transcription
Genbank (Entrez)AF068290 AK000978 BC032747 BC082990 BQ928130
RefSeq transcript (Entrez)NM_018000
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MREG
Cluster EST : UnigeneHs.620391 [ NCBI ]
CGAP (NCI)Hs.620391
Alternative Splicing GalleryENSG00000118242
Gene ExpressionMREG [ NCBI-GEO ]   MREG [ EBI - ARRAY_EXPRESS ]   MREG [ SEEK ]   MREG [ MEM ]
Gene Expression Viewer (FireBrowse)MREG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55686
GTEX Portal (Tissue expression)MREG
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N565   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N565  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N565
Splice isoforms : SwissVarQ8N565
PhosPhoSitePlusQ8N565
Domains : Interpro (EBI)Melanoregulin   
Domain families : Pfam (Sanger)MREG (PF15812)   
Domain families : Pfam (NCBI)pfam15812   
Conserved Domain (NCBI)MREG
DMDM Disease mutations55686
Blocks (Seattle)MREG
SuperfamilyQ8N565
Human Protein AtlasENSG00000118242
Peptide AtlasQ8N565
HPRD07645
IPIIPI00017515   IPI00783243   IPI00924504   IPI00981253   IPI00924967   
Protein Interaction databases
DIP (DOE-UCLA)Q8N565
IntAct (EBI)Q8N565
FunCoupENSG00000118242
BioGRIDMREG
STRING (EMBL)MREG
ZODIACMREG
Ontologies - Pathways
QuickGOQ8N565
Ontology : AmiGOapical plasma membrane  melanocyte differentiation  melanosome transport  melanosome  protein complex  
Ontology : EGO-EBIapical plasma membrane  melanocyte differentiation  melanosome transport  melanosome  protein complex  
NDEx NetworkMREG
Atlas of Cancer Signalling NetworkMREG
Wikipedia pathwaysMREG
Orthology - Evolution
OrthoDB55686
GeneTree (enSembl)ENSG00000118242
Phylogenetic Trees/Animal Genes : TreeFamMREG
HOVERGENQ8N565
HOGENOMQ8N565
Homologs : HomoloGeneMREG
Homology/Alignments : Family Browser (UCSC)MREG
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMREG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MREG
dbVarMREG
ClinVarMREG
1000_GenomesMREG 
Exome Variant ServerMREG
ExAC (Exome Aggregation Consortium)MREG (select the gene name)
Genetic variants : HAPMAP55686
Genomic Variants (DGV)MREG [DGVbeta]
DECIPHERMREG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMREG 
Mutations
ICGC Data PortalMREG 
TCGA Data PortalMREG 
Broad Tumor PortalMREG
OASIS PortalMREG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMREG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMREG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MREG
DgiDB (Drug Gene Interaction Database)MREG
DoCM (Curated mutations)MREG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MREG (select a term)
intoGenMREG
Cancer3DMREG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609207   
Orphanet
MedgenMREG
Genetic Testing Registry MREG
NextProtQ8N565 [Medical]
TSGene55686
GENETestsMREG
Target ValidationMREG
Huge Navigator MREG [HugePedia]
snp3D : Map Gene to Disease55686
BioCentury BCIQMREG
ClinGenMREG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55686
Chemical/Pharm GKB GenePA162396174
Clinical trialMREG
Miscellaneous
canSAR (ICR)MREG (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMREG
EVEXMREG
GoPubMedMREG
iHOPMREG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:05 CEST 2017

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