Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MRGPRD (MAS related GPR family member D)

Identity

Alias_namesMAS-related GPR
Alias_symbol (synonym)mrgD
Other aliasMRGD
TGR7
HGNC (Hugo) MRGPRD
LocusID (NCBI) 116512
Atlas_Id 55074
Location 11q13.3  [Link to chromosome band 11q13]
Location_base_pair Starts at 68980021 and ends at 68980986 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRGPRD   29626
Cards
Entrez_Gene (NCBI)MRGPRD  116512  MAS related GPR family member D
AliasesMRGD; TGR7
GeneCards (Weizmann)MRGPRD
Ensembl hg19 (Hinxton)ENSG00000172938 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172938 [Gene_View]  chr11:68980021-68980986 [Contig_View]  MRGPRD [Vega]
ICGC DataPortalENSG00000172938
TCGA cBioPortalMRGPRD
AceView (NCBI)MRGPRD
Genatlas (Paris)MRGPRD
WikiGenes116512
SOURCE (Princeton)MRGPRD
Genetics Home Reference (NIH)MRGPRD
Genomic and cartography
GoldenPath hg38 (UCSC)MRGPRD  -     chr11:68980021-68980986 -  11q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRGPRD  -     11q13.3   [Description]    (hg19-Feb_2009)
EnsemblMRGPRD - 11q13.3 [CytoView hg19]  MRGPRD - 11q13.3 [CytoView hg38]
Mapping of homologs : NCBIMRGPRD [Mapview hg19]  MRGPRD [Mapview hg38]
OMIM607231   
Gene and transcription
Genbank (Entrez)AB154410 AY427820 BC146427 BC156660
RefSeq transcript (Entrez)NM_198923
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MRGPRD
Cluster EST : UnigeneHs.527802 [ NCBI ]
CGAP (NCI)Hs.527802
Alternative Splicing GalleryENSG00000172938
Gene ExpressionMRGPRD [ NCBI-GEO ]   MRGPRD [ EBI - ARRAY_EXPRESS ]   MRGPRD [ SEEK ]   MRGPRD [ MEM ]
Gene Expression Viewer (FireBrowse)MRGPRD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)116512
GTEX Portal (Tissue expression)MRGPRD
Human Protein AtlasENSG00000172938-MRGPRD [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TDS7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TDS7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TDS7
Splice isoforms : SwissVarQ8TDS7
PhosPhoSitePlusQ8TDS7
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    MRGPCRD    MRGPCRFAMILY   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)MRGPRD
DMDM Disease mutations116512
Blocks (Seattle)MRGPRD
SuperfamilyQ8TDS7
Human Protein Atlas [tissue]ENSG00000172938-MRGPRD [tissue]
Peptide AtlasQ8TDS7
HPRD06250
IPIIPI00447219   
Protein Interaction databases
DIP (DOE-UCLA)Q8TDS7
IntAct (EBI)Q8TDS7
FunCoupENSG00000172938
BioGRIDMRGPRD
STRING (EMBL)MRGPRD
ZODIACMRGPRD
Ontologies - Pathways
QuickGOQ8TDS7
Ontology : AmiGOG-protein coupled receptor activity  extracellular space  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  extracellular space  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkMRGPRD
Atlas of Cancer Signalling NetworkMRGPRD
Wikipedia pathwaysMRGPRD
Orthology - Evolution
OrthoDB116512
GeneTree (enSembl)ENSG00000172938
Phylogenetic Trees/Animal Genes : TreeFamMRGPRD
HOVERGENQ8TDS7
HOGENOMQ8TDS7
Homologs : HomoloGeneMRGPRD
Homology/Alignments : Family Browser (UCSC)MRGPRD
Gene fusions - Rearrangements
Tumor Fusion PortalMRGPRD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRGPRD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRGPRD
dbVarMRGPRD
ClinVarMRGPRD
1000_GenomesMRGPRD 
Exome Variant ServerMRGPRD
ExAC (Exome Aggregation Consortium)ENSG00000172938
GNOMAD BrowserENSG00000172938
Genetic variants : HAPMAP116512
Genomic Variants (DGV)MRGPRD [DGVbeta]
DECIPHERMRGPRD [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMRGPRD 
Mutations
ICGC Data PortalMRGPRD 
TCGA Data PortalMRGPRD 
Broad Tumor PortalMRGPRD
OASIS PortalMRGPRD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRGPRD  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRGPRD
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MRGPRD
DgiDB (Drug Gene Interaction Database)MRGPRD
DoCM (Curated mutations)MRGPRD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRGPRD (select a term)
intoGenMRGPRD
Cancer3DMRGPRD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607231   
Orphanet
DisGeNETMRGPRD
MedgenMRGPRD
Genetic Testing Registry MRGPRD
NextProtQ8TDS7 [Medical]
TSGene116512
GENETestsMRGPRD
Target ValidationMRGPRD
Huge Navigator MRGPRD [HugePedia]
snp3D : Map Gene to Disease116512
BioCentury BCIQMRGPRD
ClinGenMRGPRD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD116512
Chemical/Pharm GKB GenePA134978563
Clinical trialMRGPRD
Miscellaneous
canSAR (ICR)MRGPRD (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRGPRD
EVEXMRGPRD
GoPubMedMRGPRD
iHOPMRGPRD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:24:45 CET 2017

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