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MRGPRG-AS1 (MRGPRG antisense RNA 1)

Identity

Alias_namesC11orf36
chromosome 11 open reading frame 36
MRGPRG antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)FLJ36102
HSD-40
Other alias
HGNC (Hugo) MRGPRG-AS1
LocusID (NCBI) 283303
Atlas_Id 70414
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 3218332 and ends at 3223131 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRGPRG-AS1   26691
Cards
Entrez_Gene (NCBI)MRGPRG-AS1  283303  MRGPRG antisense RNA 1
AliasesC11orf36; HSD-40
GeneCards (Weizmann)MRGPRG-AS1
Ensembl hg19 (Hinxton)ENSG00000236301 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236301 [Gene_View]  chr11:3218332-3223131 [Contig_View]  MRGPRG-AS1 [Vega]
ICGC DataPortalENSG00000236301
TCGA cBioPortalMRGPRG-AS1
AceView (NCBI)MRGPRG-AS1
Genatlas (Paris)MRGPRG-AS1
WikiGenes283303
SOURCE (Princeton)MRGPRG-AS1
Genetics Home Reference (NIH)MRGPRG-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)MRGPRG-AS1  -     chr11:3218332-3223131 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRGPRG-AS1  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblMRGPRG-AS1 - 11p15.4 [CytoView hg19]  MRGPRG-AS1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIMRGPRG-AS1 [Mapview hg19]  MRGPRG-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093421 AK097749 AY422795 BC104971 BC104973
RefSeq transcript (Entrez)NM_173590
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MRGPRG-AS1
Cluster EST : UnigeneHs.151154 [ NCBI ]
CGAP (NCI)Hs.151154
Alternative Splicing GalleryENSG00000236301
Gene ExpressionMRGPRG-AS1 [ NCBI-GEO ]   MRGPRG-AS1 [ EBI - ARRAY_EXPRESS ]   MRGPRG-AS1 [ SEEK ]   MRGPRG-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)MRGPRG-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283303
GTEX Portal (Tissue expression)MRGPRG-AS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2M3A8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2M3A8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2M3A8
Splice isoforms : SwissVarQ2M3A8
PhosPhoSitePlusQ2M3A8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MRGPRG-AS1
DMDM Disease mutations283303
Blocks (Seattle)MRGPRG-AS1
SuperfamilyQ2M3A8
Human Protein AtlasENSG00000236301
Peptide AtlasQ2M3A8
HPRD08770
IPIIPI00175215   IPI00981427   
Protein Interaction databases
DIP (DOE-UCLA)Q2M3A8
IntAct (EBI)Q2M3A8
FunCoupENSG00000236301
BioGRIDMRGPRG-AS1
STRING (EMBL)MRGPRG-AS1
ZODIACMRGPRG-AS1
Ontologies - Pathways
QuickGOQ2M3A8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkMRGPRG-AS1
Atlas of Cancer Signalling NetworkMRGPRG-AS1
Wikipedia pathwaysMRGPRG-AS1
Orthology - Evolution
OrthoDB283303
GeneTree (enSembl)ENSG00000236301
Phylogenetic Trees/Animal Genes : TreeFamMRGPRG-AS1
HOVERGENQ2M3A8
HOGENOMQ2M3A8
Homologs : HomoloGeneMRGPRG-AS1
Homology/Alignments : Family Browser (UCSC)MRGPRG-AS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRGPRG-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRGPRG-AS1
dbVarMRGPRG-AS1
ClinVarMRGPRG-AS1
1000_GenomesMRGPRG-AS1 
Exome Variant ServerMRGPRG-AS1
ExAC (Exome Aggregation Consortium)MRGPRG-AS1 (select the gene name)
Genetic variants : HAPMAP283303
Genomic Variants (DGV)MRGPRG-AS1 [DGVbeta]
DECIPHERMRGPRG-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMRGPRG-AS1 
Mutations
ICGC Data PortalMRGPRG-AS1 
TCGA Data PortalMRGPRG-AS1 
Broad Tumor PortalMRGPRG-AS1
OASIS PortalMRGPRG-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMRGPRG-AS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MRGPRG-AS1
DgiDB (Drug Gene Interaction Database)MRGPRG-AS1
DoCM (Curated mutations)MRGPRG-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRGPRG-AS1 (select a term)
intoGenMRGPRG-AS1
Cancer3DMRGPRG-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMRGPRG-AS1
Genetic Testing Registry MRGPRG-AS1
NextProtQ2M3A8 [Medical]
TSGene283303
GENETestsMRGPRG-AS1
Target ValidationMRGPRG-AS1
Huge Navigator MRGPRG-AS1 [HugePedia]
snp3D : Map Gene to Disease283303
BioCentury BCIQMRGPRG-AS1
ClinGenMRGPRG-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283303
Chemical/Pharm GKB GenePA142672303
Clinical trialMRGPRG-AS1
Miscellaneous
canSAR (ICR)MRGPRG-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRGPRG-AS1
EVEXMRGPRG-AS1
GoPubMedMRGPRG-AS1
iHOPMRGPRG-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:32:50 CEST 2017

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