Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MRGPRX1 (MAS-related GPR, member X1)

Identity

Alias_namesMAS-related GPR, member X1
Alias_symbol (synonym)MRGX1
Other aliasGPCR
MGRG2
SNSR4
HGNC (Hugo) MRGPRX1
LocusID (NCBI) 259249
Atlas_Id 70415
Location 11p15.1  [Link to chromosome band 11p15]
Location_base_pair Starts at 18955360 and ends at 18956549 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRGPRX1   17962
Cards
Entrez_Gene (NCBI)MRGPRX1  259249  MAS-related GPR, member X1
AliasesGPCR; MGRG2; MRGX1; SNSR4
GeneCards (Weizmann)MRGPRX1
Ensembl hg19 (Hinxton)ENSG00000170255 [Gene_View]  chr11:18955360-18956549 [Contig_View]  MRGPRX1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000170255 [Gene_View]  chr11:18955360-18956549 [Contig_View]  MRGPRX1 [Vega]
ICGC DataPortalENSG00000170255
TCGA cBioPortalMRGPRX1
AceView (NCBI)MRGPRX1
Genatlas (Paris)MRGPRX1
WikiGenes259249
SOURCE (Princeton)MRGPRX1
Genetics Home Reference (NIH)MRGPRX1
Genomic and cartography
GoldenPath hg19 (UCSC)MRGPRX1  -     chr11:18955360-18956549 -  11p15.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MRGPRX1  -     11p15.1   [Description]    (hg38-Dec_2013)
EnsemblMRGPRX1 - 11p15.1 [CytoView hg19]  MRGPRX1 - 11p15.1 [CytoView hg38]
Mapping of homologs : NCBIMRGPRX1 [Mapview hg19]  MRGPRX1 [Mapview hg38]
OMIM607227   
Gene and transcription
Genbank (Entrez)BC096835
RefSeq transcript (Entrez)NM_147199
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_009237 NW_004929378
Consensus coding sequences : CCDS (NCBI)MRGPRX1
Cluster EST : UnigeneHs.711459 [ NCBI ]
CGAP (NCI)Hs.711459
Alternative Splicing GalleryENSG00000170255
Gene ExpressionMRGPRX1 [ NCBI-GEO ]   MRGPRX1 [ EBI - ARRAY_EXPRESS ]   MRGPRX1 [ SEEK ]   MRGPRX1 [ MEM ]
Gene Expression Viewer (FireBrowse)MRGPRX1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)259249
GTEX Portal (Tissue expression)MRGPRX1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LB2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LB2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LB2
Splice isoforms : SwissVarQ96LB2
PhosPhoSitePlusQ96LB2
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    MRGPCRFAMILY   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)MRGPRX1
DMDM Disease mutations259249
Blocks (Seattle)MRGPRX1
SuperfamilyQ96LB2
Human Protein AtlasENSG00000170255
Peptide AtlasQ96LB2
HPRD06246
IPIIPI00064964   
Protein Interaction databases
DIP (DOE-UCLA)Q96LB2
IntAct (EBI)Q96LB2
FunCoupENSG00000170255
BioGRIDMRGPRX1
STRING (EMBL)MRGPRX1
ZODIACMRGPRX1
Ontologies - Pathways
QuickGOQ96LB2
Ontology : AmiGOG-protein coupled receptor activity  integral component of plasma membrane  acute-phase response  G-protein coupled receptor signaling pathway  
Ontology : EGO-EBIG-protein coupled receptor activity  integral component of plasma membrane  acute-phase response  G-protein coupled receptor signaling pathway  
NDEx NetworkMRGPRX1
Atlas of Cancer Signalling NetworkMRGPRX1
Wikipedia pathwaysMRGPRX1
Orthology - Evolution
OrthoDB259249
GeneTree (enSembl)ENSG00000170255
Phylogenetic Trees/Animal Genes : TreeFamMRGPRX1
HOVERGENQ96LB2
HOGENOMQ96LB2
Homologs : HomoloGeneMRGPRX1
Homology/Alignments : Family Browser (UCSC)MRGPRX1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRGPRX1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRGPRX1
dbVarMRGPRX1
ClinVarMRGPRX1
1000_GenomesMRGPRX1 
Exome Variant ServerMRGPRX1
ExAC (Exome Aggregation Consortium)MRGPRX1 (select the gene name)
Genetic variants : HAPMAP259249
Genomic Variants (DGV)MRGPRX1 [DGVbeta]
DECIPHER (Syndromes)11:18955360-18956549  ENSG00000170255
CONAN: Copy Number AnalysisMRGPRX1 
Mutations
ICGC Data PortalMRGPRX1 
TCGA Data PortalMRGPRX1 
Broad Tumor PortalMRGPRX1
OASIS PortalMRGPRX1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRGPRX1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRGPRX1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MRGPRX1
DgiDB (Drug Gene Interaction Database)MRGPRX1
DoCM (Curated mutations)MRGPRX1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRGPRX1 (select a term)
intoGenMRGPRX1
Cancer3DMRGPRX1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607227   
Orphanet
MedgenMRGPRX1
Genetic Testing Registry MRGPRX1
NextProtQ96LB2 [Medical]
TSGene259249
GENETestsMRGPRX1
Huge Navigator MRGPRX1 [HugePedia]
snp3D : Map Gene to Disease259249
BioCentury BCIQMRGPRX1
ClinGenMRGPRX1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD259249
Chemical/Pharm GKB GenePA142671334
Clinical trialMRGPRX1
Miscellaneous
canSAR (ICR)MRGPRX1 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRGPRX1
EVEXMRGPRX1
GoPubMedMRGPRX1
iHOPMRGPRX1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:33:35 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.