Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MRO (maestro)

Identity

Alias_namesC18orf3
chromosome 18 open reading frame 3
Alias_symbol (synonym)B29
FLJ30140
Other alias
HGNC (Hugo) MRO
LocusID (NCBI) 83876
Atlas_Id 70420
Location 18q21.2  [Link to chromosome band 18q21]
Location_base_pair Starts at 50795120 and ends at 50825384 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)		MRO (18q21.2) / RORA (15q22.2)MRO (18q21.2) / SLC1A2 (11p13)SUPT6H (17q11.2) / MRO (18q21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MRO   24121
Cards
Entrez_Gene (NCBI)MRO  83876  maestro
AliasesB29; C18orf3
GeneCards (Weizmann)MRO
Ensembl hg19 (Hinxton)ENSG00000134042 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134042 [Gene_View]  chr18:50795120-50825384 [Contig_View]  MRO [Vega]
ICGC DataPortalENSG00000134042
TCGA cBioPortalMRO
AceView (NCBI)MRO
Genatlas (Paris)MRO
WikiGenes83876
SOURCE (Princeton)MRO
Genetics Home Reference (NIH)MRO
Genomic and cartography
GoldenPath hg38 (UCSC)MRO  -     chr18:50795120-50825384 -  18q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRO  -     18q21.2   [Description]    (hg19-Feb_2009)
EnsemblMRO - 18q21.2 [CytoView hg19]  MRO - 18q21.2 [CytoView hg38]
Mapping of homologs : NCBIMRO [Mapview hg19]  MRO [Mapview hg38]
OMIM608080   
Gene and transcription
Genbank (Entrez)AB042647 AI479272 AI829586 AK054702 AK294757
RefSeq transcript (Entrez)NM_001127174 NM_001127175 NM_001127176 NM_031939
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MRO
Cluster EST : UnigeneHs.30495 [ NCBI ]
CGAP (NCI)Hs.30495
Alternative Splicing GalleryENSG00000134042
Gene ExpressionMRO [ NCBI-GEO ]   MRO [ EBI - ARRAY_EXPRESS ]   MRO [ SEEK ]   MRO [ MEM ]
Gene Expression Viewer (FireBrowse)MRO [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83876
GTEX Portal (Tissue expression)MRO
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BYG7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BYG7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BYG7
Splice isoforms : SwissVarQ9BYG7
PhosPhoSitePlusQ9BYG7
Domains : Interpro (EBI)ARM-like    ARM-type_fold   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MRO
DMDM Disease mutations83876
Blocks (Seattle)MRO
SuperfamilyQ9BYG7
Human Protein AtlasENSG00000134042
Peptide AtlasQ9BYG7
HPRD16276
IPIIPI00550876   IPI00643875   IPI00895823   IPI00895893   
Protein Interaction databases
DIP (DOE-UCLA)Q9BYG7
IntAct (EBI)Q9BYG7
FunCoupENSG00000134042
BioGRIDMRO
STRING (EMBL)MRO
ZODIACMRO
Ontologies - Pathways
QuickGOQ9BYG7
Ontology : AmiGOnucleolus  
Ontology : EGO-EBInucleolus  
NDEx NetworkMRO
Atlas of Cancer Signalling NetworkMRO
Wikipedia pathwaysMRO
Orthology - Evolution
OrthoDB83876
GeneTree (enSembl)ENSG00000134042
Phylogenetic Trees/Animal Genes : TreeFamMRO
HOVERGENQ9BYG7
HOGENOMQ9BYG7
Homologs : HomoloGeneMRO
Homology/Alignments : Family Browser (UCSC)MRO
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRO [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRO
dbVarMRO
ClinVarMRO
1000_GenomesMRO 
Exome Variant ServerMRO
ExAC (Exome Aggregation Consortium)MRO (select the gene name)
Genetic variants : HAPMAP83876
Genomic Variants (DGV)MRO [DGVbeta]
DECIPHERMRO [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMRO 
Mutations
ICGC Data PortalMRO 
TCGA Data PortalMRO 
Broad Tumor PortalMRO
OASIS PortalMRO [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRO  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRO
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MRO
DgiDB (Drug Gene Interaction Database)MRO
DoCM (Curated mutations)MRO (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRO (select a term)
intoGenMRO
Cancer3DMRO(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608080   
Orphanet
MedgenMRO
Genetic Testing Registry MRO
NextProtQ9BYG7 [Medical]
TSGene83876
GENETestsMRO
Target ValidationMRO
Huge Navigator MRO [HugePedia]
snp3D : Map Gene to Disease83876
BioCentury BCIQMRO
ClinGenMRO
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83876
Chemical/Pharm GKB GenePA134932281
Clinical trialMRO
Miscellaneous
canSAR (ICR)MRO (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRO
EVEXMRO
GoPubMedMRO
iHOPMRO
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:07 CEST 2017
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