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MRPL19 (mitochondrial ribosomal protein L19)

Identity

Alias_symbol (synonym)MRP-L15
RPML15
KIAA0104
RLX1
Other aliasL19mt
MRP-L19
MRPL15
HGNC (Hugo) MRPL19
LocusID (NCBI) 9801
Atlas_Id 70441
Location 2p12  [Link to chromosome band 2p12]
Location_base_pair Starts at 75646783 and ends at 75662208 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MRPL19 (2p12) / PTBP2 (1p21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRPL19   14052
Cards
Entrez_Gene (NCBI)MRPL19  9801  mitochondrial ribosomal protein L19
AliasesL19mt; MRP-L15; MRP-L19; MRPL15; 
RLX1; RPML15
GeneCards (Weizmann)MRPL19
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:75646783-75662208 [Contig_View]  MRPL19 [Vega]
TCGA cBioPortalMRPL19
AceView (NCBI)MRPL19
Genatlas (Paris)MRPL19
WikiGenes9801
SOURCE (Princeton)MRPL19
Genetics Home Reference (NIH)MRPL19
Genomic and cartography
GoldenPath hg38 (UCSC)MRPL19  -     chr2:75646783-75662208 +  2p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRPL19  -     2p12   [Description]    (hg19-Feb_2009)
EnsemblMRPL19 - 2p12 [CytoView hg19]  MRPL19 - 2p12 [CytoView hg38]
Mapping of homologs : NCBIMRPL19 [Mapview hg19]  MRPL19 [Mapview hg38]
OMIM611832   
Gene and transcription
Genbank (Entrez)AK291250 AK295578 AL157503 BC021051 BC030144
RefSeq transcript (Entrez)NM_014763
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MRPL19
Cluster EST : UnigeneHs.44024 [ NCBI ]
CGAP (NCI)Hs.44024
Gene ExpressionMRPL19 [ NCBI-GEO ]   MRPL19 [ EBI - ARRAY_EXPRESS ]   MRPL19 [ SEEK ]   MRPL19 [ MEM ]
Gene Expression Viewer (FireBrowse)MRPL19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9801
GTEX Portal (Tissue expression)MRPL19
Protein : pattern, domain, 3D structure
UniProt/SwissProtP49406   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP49406  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP49406
Splice isoforms : SwissVarP49406
PhosPhoSitePlusP49406
Domains : Interpro (EBI)Ribosomal_L19    Translation_prot_SH3-like   
Domain families : Pfam (Sanger)Ribosomal_L19 (PF01245)   
Domain families : Pfam (NCBI)pfam01245   
Conserved Domain (NCBI)MRPL19
DMDM Disease mutations9801
Blocks (Seattle)MRPL19
PDB (SRS)3J7Y    3J9M   
PDB (PDBSum)3J7Y    3J9M   
PDB (IMB)3J7Y    3J9M   
PDB (RSDB)3J7Y    3J9M   
Structural Biology KnowledgeBase3J7Y    3J9M   
SCOP (Structural Classification of Proteins)3J7Y    3J9M   
CATH (Classification of proteins structures)3J7Y    3J9M   
SuperfamilyP49406
Peptide AtlasP49406
HPRD11370
IPIIPI00027096   IPI00917039   IPI00874009   
Protein Interaction databases
DIP (DOE-UCLA)P49406
IntAct (EBI)P49406
BioGRIDMRPL19
STRING (EMBL)MRPL19
ZODIACMRPL19
Ontologies - Pathways
QuickGOP49406
Ontology : AmiGOstructural constituent of ribosome  nucleus  mitochondrion  mitochondrial inner membrane  mitochondrial large ribosomal subunit  nuclear membrane  mitochondrial translational elongation  mitochondrial translational termination  
Ontology : EGO-EBIstructural constituent of ribosome  nucleus  mitochondrion  mitochondrial inner membrane  mitochondrial large ribosomal subunit  nuclear membrane  mitochondrial translational elongation  mitochondrial translational termination  
Pathways : KEGGRibosome   
NDEx NetworkMRPL19
Atlas of Cancer Signalling NetworkMRPL19
Wikipedia pathwaysMRPL19
Orthology - Evolution
OrthoDB9801
Phylogenetic Trees/Animal Genes : TreeFamMRPL19
HOVERGENP49406
HOGENOMP49406
Homologs : HomoloGeneMRPL19
Homology/Alignments : Family Browser (UCSC)MRPL19
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRPL19 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRPL19
dbVarMRPL19
ClinVarMRPL19
1000_GenomesMRPL19 
Exome Variant ServerMRPL19
ExAC (Exome Aggregation Consortium)MRPL19 (select the gene name)
Genetic variants : HAPMAP9801
Genomic Variants (DGV)MRPL19 [DGVbeta]
DECIPHERMRPL19 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMRPL19 
Mutations
ICGC Data PortalMRPL19 
TCGA Data PortalMRPL19 
Broad Tumor PortalMRPL19
OASIS PortalMRPL19 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRPL19  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRPL19
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MRPL19
DgiDB (Drug Gene Interaction Database)MRPL19
DoCM (Curated mutations)MRPL19 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRPL19 (select a term)
intoGenMRPL19
Cancer3DMRPL19(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611832   
Orphanet
MedgenMRPL19
Genetic Testing Registry MRPL19
NextProtP49406 [Medical]
TSGene9801
GENETestsMRPL19
Target ValidationMRPL19
Huge Navigator MRPL19 [HugePedia]
snp3D : Map Gene to Disease9801
BioCentury BCIQMRPL19
ClinGenMRPL19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9801
Chemical/Pharm GKB GenePA30948
Clinical trialMRPL19
Miscellaneous
canSAR (ICR)MRPL19 (select the gene name)
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRPL19
EVEXMRPL19
GoPubMedMRPL19
iHOPMRPL19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:10 CEST 2017

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