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MRPL35 (mitochondrial ribosomal protein L35)

Identity

Other aliasL35mt
MRP-L35
HGNC (Hugo) MRPL35
LocusID (NCBI) 51318
Atlas_Id 70454
Location 2p11.2  [Link to chromosome band 2p11]
Location_base_pair Starts at 86199433 and ends at 86213354 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
EML4 (2p21) / MRPL35 (2p11.2)MRPL35 (2p11.2) / CTNNA2 (2p12)MRPL35 (2p11.2) / MLLT6 (17q12)
MRPL35 (2p11.2) / PEPD (19q13.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRPL35   14489
Cards
Entrez_Gene (NCBI)MRPL35  51318  mitochondrial ribosomal protein L35
AliasesL35mt; MRP-L35
GeneCards (Weizmann)MRPL35
Ensembl hg19 (Hinxton)ENSG00000132313 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132313 [Gene_View]  chr2:86199433-86213354 [Contig_View]  MRPL35 [Vega]
ICGC DataPortalENSG00000132313
TCGA cBioPortalMRPL35
AceView (NCBI)MRPL35
Genatlas (Paris)MRPL35
WikiGenes51318
SOURCE (Princeton)MRPL35
Genetics Home Reference (NIH)MRPL35
Genomic and cartography
GoldenPath hg38 (UCSC)MRPL35  -     chr2:86199433-86213354 +  2p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRPL35  -     2p11.2   [Description]    (hg19-Feb_2009)
EnsemblMRPL35 - 2p11.2 [CytoView hg19]  MRPL35 - 2p11.2 [CytoView hg38]
Mapping of homologs : NCBIMRPL35 [Mapview hg19]  MRPL35 [Mapview hg38]
OMIM611841   
Gene and transcription
Genbank (Entrez)AF208849 AK026220 AK074352 AK314555 AK314577
RefSeq transcript (Entrez)NM_016622 NM_145644
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MRPL35
Cluster EST : UnigeneHs.433439 [ NCBI ]
CGAP (NCI)Hs.433439
Alternative Splicing GalleryENSG00000132313
Gene ExpressionMRPL35 [ NCBI-GEO ]   MRPL35 [ EBI - ARRAY_EXPRESS ]   MRPL35 [ SEEK ]   MRPL35 [ MEM ]
Gene Expression Viewer (FireBrowse)MRPL35 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51318
GTEX Portal (Tissue expression)MRPL35
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZE8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NZE8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NZE8
Splice isoforms : SwissVarQ9NZE8
PhosPhoSitePlusQ9NZE8
Domains : Interpro (EBI)Ribosomal-L35_mit    Ribosomal_L35   
Domain families : Pfam (Sanger)Ribosomal_L35p (PF01632)   
Domain families : Pfam (NCBI)pfam01632   
Conserved Domain (NCBI)MRPL35
DMDM Disease mutations51318
Blocks (Seattle)MRPL35
PDB (SRS)3J7Y    3J9M   
PDB (PDBSum)3J7Y    3J9M   
PDB (IMB)3J7Y    3J9M   
PDB (RSDB)3J7Y    3J9M   
Structural Biology KnowledgeBase3J7Y    3J9M   
SCOP (Structural Classification of Proteins)3J7Y    3J9M   
CATH (Classification of proteins structures)3J7Y    3J9M   
SuperfamilyQ9NZE8
Human Protein AtlasENSG00000132313
Peptide AtlasQ9NZE8
HPRD14755
IPIIPI00179019   IPI00828184   IPI00916711   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZE8
IntAct (EBI)Q9NZE8
FunCoupENSG00000132313
BioGRIDMRPL35
STRING (EMBL)MRPL35
ZODIACMRPL35
Ontologies - Pathways
QuickGOQ9NZE8
Ontology : AmiGOstructural constituent of ribosome  mitochondrial inner membrane  mitochondrial ribosome  mitochondrial large ribosomal subunit  translation  mitochondrial translational elongation  mitochondrial translational termination  
Ontology : EGO-EBIstructural constituent of ribosome  mitochondrial inner membrane  mitochondrial ribosome  mitochondrial large ribosomal subunit  translation  mitochondrial translational elongation  mitochondrial translational termination  
Pathways : KEGGRibosome   
NDEx NetworkMRPL35
Atlas of Cancer Signalling NetworkMRPL35
Wikipedia pathwaysMRPL35
Orthology - Evolution
OrthoDB51318
GeneTree (enSembl)ENSG00000132313
Phylogenetic Trees/Animal Genes : TreeFamMRPL35
HOVERGENQ9NZE8
HOGENOMQ9NZE8
Homologs : HomoloGeneMRPL35
Homology/Alignments : Family Browser (UCSC)MRPL35
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRPL35 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRPL35
dbVarMRPL35
ClinVarMRPL35
1000_GenomesMRPL35 
Exome Variant ServerMRPL35
ExAC (Exome Aggregation Consortium)MRPL35 (select the gene name)
Genetic variants : HAPMAP51318
Genomic Variants (DGV)MRPL35 [DGVbeta]
DECIPHERMRPL35 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMRPL35 
Mutations
ICGC Data PortalMRPL35 
TCGA Data PortalMRPL35 
Broad Tumor PortalMRPL35
OASIS PortalMRPL35 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRPL35  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRPL35
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MRPL35
DgiDB (Drug Gene Interaction Database)MRPL35
DoCM (Curated mutations)MRPL35 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRPL35 (select a term)
intoGenMRPL35
Cancer3DMRPL35(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611841   
Orphanet
MedgenMRPL35
Genetic Testing Registry MRPL35
NextProtQ9NZE8 [Medical]
TSGene51318
GENETestsMRPL35
Target ValidationMRPL35
Huge Navigator MRPL35 [HugePedia]
snp3D : Map Gene to Disease51318
BioCentury BCIQMRPL35
ClinGenMRPL35
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51318
Chemical/Pharm GKB GenePA30966
Clinical trialMRPL35
Miscellaneous
canSAR (ICR)MRPL35 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRPL35
EVEXMRPL35
GoPubMedMRPL35
iHOPMRPL35
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:31:29 CEST 2017

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