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MRPL51 (mitochondrial ribosomal protein L51)

Identity

Alias_namesMRP64
mitochondrial ribosomal protein 64
Alias_symbol (synonym)CDA09
HSPC241
bMRP64
Other alias
HGNC (Hugo) MRPL51
LocusID (NCBI) 51258
Atlas_Id 70466
Location 12p13.31  [Link to chromosome band 12p13]
Location_base_pair Starts at 6601316 and ends at 6602471 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CLSTN1 (1p36.22) / MRPL51 (12p13.31)HRH1 (3p25.3) / MRPL51 (12p13.31)MRPL51 (12p13.31) / MRPL51 (12p13.31)
MRPL51 (12p13.31) / SPTLC1 (9q22.31)MRPL51 (12p13.31) / SRSF5 (14q24.2)NCAPD2 (12p13.31) / MRPL51 (12p13.31)
OSBPL10 (3p23) / MRPL51 (12p13.31)YY1AP1 (1q22) / MRPL51 (12p13.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRPL51   14044
Cards
Entrez_Gene (NCBI)MRPL51  51258  mitochondrial ribosomal protein L51
AliasesCDA09; HSPC241; MRP64; bMRP64
GeneCards (Weizmann)MRPL51
Ensembl hg19 (Hinxton) [Gene_View]  chr12:6601316-6602471 [Contig_View]  MRPL51 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:6601316-6602471 [Contig_View]  MRPL51 [Vega]
TCGA cBioPortalMRPL51
AceView (NCBI)MRPL51
Genatlas (Paris)MRPL51
WikiGenes51258
SOURCE (Princeton)MRPL51
Genetics Home Reference (NIH)MRPL51
Genomic and cartography
GoldenPath hg19 (UCSC)MRPL51  -     chr12:6601316-6602471 -  12p13.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MRPL51  -     12p13.31   [Description]    (hg38-Dec_2013)
EnsemblMRPL51 - 12p13.31 [CytoView hg19]  MRPL51 - 12p13.31 [CytoView hg38]
Mapping of homologs : NCBIMRPL51 [Mapview hg19]  MRPL51 [Mapview hg38]
OMIM611855   
Gene and transcription
Genbank (Entrez)AB049959 AF151075 AF212248 BC000191 BC014329
RefSeq transcript (Entrez)NM_016497
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_009759 NW_004929382
Consensus coding sequences : CCDS (NCBI)MRPL51
Cluster EST : UnigeneHs.55847 [ NCBI ]
CGAP (NCI)Hs.55847
Gene ExpressionMRPL51 [ NCBI-GEO ]   MRPL51 [ EBI - ARRAY_EXPRESS ]   MRPL51 [ SEEK ]   MRPL51 [ MEM ]
Gene Expression Viewer (FireBrowse)MRPL51 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51258
GTEX Portal (Tissue expression)MRPL51
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ4U2R6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ4U2R6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ4U2R6
Splice isoforms : SwissVarQ4U2R6
PhosPhoSitePlusQ4U2R6
Domains : Interpro (EBI)Ribosomal_L51_mit   
Domain families : Pfam (Sanger)MRP-L51 (PF10244)   
Domain families : Pfam (NCBI)pfam10244   
Conserved Domain (NCBI)MRPL51
DMDM Disease mutations51258
Blocks (Seattle)MRPL51
PDB (SRS)3J7Y   
PDB (PDBSum)3J7Y   
PDB (IMB)3J7Y   
PDB (RSDB)3J7Y   
Structural Biology KnowledgeBase3J7Y   
SCOP (Structural Classification of Proteins)3J7Y   
CATH (Classification of proteins structures)3J7Y   
SuperfamilyQ4U2R6
Peptide AtlasQ4U2R6
HPRD14769
IPIIPI00607627   
Protein Interaction databases
DIP (DOE-UCLA)Q4U2R6
IntAct (EBI)Q4U2R6
BioGRIDMRPL51
STRING (EMBL)MRPL51
ZODIACMRPL51
Ontologies - Pathways
QuickGOQ4U2R6
Ontology : AmiGOstructural constituent of ribosome  protein binding  mitochondrial inner membrane  mitochondrial ribosome  mitochondrial large ribosomal subunit  translation  organelle organization  mitochondrial translation  mitochondrial translation  mitochondrial translational initiation  mitochondrial translational elongation  mitochondrial translational termination  
Ontology : EGO-EBIstructural constituent of ribosome  protein binding  mitochondrial inner membrane  mitochondrial ribosome  mitochondrial large ribosomal subunit  translation  organelle organization  mitochondrial translation  mitochondrial translation  mitochondrial translational initiation  mitochondrial translational elongation  mitochondrial translational termination  
NDEx NetworkMRPL51
Atlas of Cancer Signalling NetworkMRPL51
Wikipedia pathwaysMRPL51
Orthology - Evolution
OrthoDB51258
Phylogenetic Trees/Animal Genes : TreeFamMRPL51
HOVERGENQ4U2R6
HOGENOMQ4U2R6
Homologs : HomoloGeneMRPL51
Homology/Alignments : Family Browser (UCSC)MRPL51
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRPL51 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRPL51
dbVarMRPL51
ClinVarMRPL51
1000_GenomesMRPL51 
Exome Variant ServerMRPL51
ExAC (Exome Aggregation Consortium)MRPL51 (select the gene name)
Genetic variants : HAPMAP51258
Genomic Variants (DGV)MRPL51 [DGVbeta]
DECIPHER (Syndromes)12:6601316-6602471  
CONAN: Copy Number AnalysisMRPL51 
Mutations
ICGC Data PortalMRPL51 
TCGA Data PortalMRPL51 
Broad Tumor PortalMRPL51
OASIS PortalMRPL51 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRPL51  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRPL51
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MRPL51
DgiDB (Drug Gene Interaction Database)MRPL51
DoCM (Curated mutations)MRPL51 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRPL51 (select a term)
intoGenMRPL51
Cancer3DMRPL51(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611855   
Orphanet
MedgenMRPL51
Genetic Testing Registry MRPL51
NextProtQ4U2R6 [Medical]
TSGene51258
GENETestsMRPL51
Huge Navigator MRPL51 [HugePedia]
snp3D : Map Gene to Disease51258
BioCentury BCIQMRPL51
ClinGenMRPL51
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51258
Chemical/Pharm GKB GenePA30984
Clinical trialMRPL51
Miscellaneous
canSAR (ICR)MRPL51 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRPL51
EVEXMRPL51
GoPubMedMRPL51
iHOPMRPL51
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:33:46 CET 2017

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