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MRPS14 (mitochondrial ribosomal protein S14)

Identity

Alias_symbol (synonym)HSMRPS14
Other aliasDJ262D12.2
MRP-S14
S14mt
HGNC (Hugo) MRPS14
LocusID (NCBI) 63931
Atlas_Id 70473
Location 1q25.1  [Link to chromosome band 1q25]
Location_base_pair Starts at 175012958 and ends at 175023455 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRPS14   14049
Cards
Entrez_Gene (NCBI)MRPS14  63931  mitochondrial ribosomal protein S14
AliasesDJ262D12.2; HSMRPS14; MRP-S14; S14mt
GeneCards (Weizmann)MRPS14
Ensembl hg19 (Hinxton)ENSG00000120333 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000120333 [Gene_View]  chr1:175012958-175023455 [Contig_View]  MRPS14 [Vega]
ICGC DataPortalENSG00000120333
TCGA cBioPortalMRPS14
AceView (NCBI)MRPS14
Genatlas (Paris)MRPS14
WikiGenes63931
SOURCE (Princeton)MRPS14
Genetics Home Reference (NIH)MRPS14
Genomic and cartography
GoldenPath hg38 (UCSC)MRPS14  -     chr1:175012958-175023455 -  1q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRPS14  -     1q25.1   [Description]    (hg19-Feb_2009)
EnsemblMRPS14 - 1q25.1 [CytoView hg19]  MRPS14 - 1q25.1 [CytoView hg38]
Mapping of homologs : NCBIMRPS14 [Mapview hg19]  MRPS14 [Mapview hg38]
OMIM611978   
Gene and transcription
Genbank (Entrez)AI086885 AK310915 AK311759 AL049705 BC009788
RefSeq transcript (Entrez)NM_022100
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MRPS14
Cluster EST : UnigeneHs.654858 [ NCBI ]
CGAP (NCI)Hs.654858
Alternative Splicing GalleryENSG00000120333
Gene ExpressionMRPS14 [ NCBI-GEO ]   MRPS14 [ EBI - ARRAY_EXPRESS ]   MRPS14 [ SEEK ]   MRPS14 [ MEM ]
Gene Expression Viewer (FireBrowse)MRPS14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)63931
GTEX Portal (Tissue expression)MRPS14
Protein : pattern, domain, 3D structure
UniProt/SwissProtO60783   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO60783  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO60783
Splice isoforms : SwissVarO60783
PhosPhoSitePlusO60783
Domains : Interpro (EBI)Ribosomal_S14   
Domain families : Pfam (Sanger)Ribosomal_S14 (PF00253)   
Domain families : Pfam (NCBI)pfam00253   
Conserved Domain (NCBI)MRPS14
DMDM Disease mutations63931
Blocks (Seattle)MRPS14
PDB (SRS)3J9M   
PDB (PDBSum)3J9M   
PDB (IMB)3J9M   
PDB (RSDB)3J9M   
Structural Biology KnowledgeBase3J9M   
SCOP (Structural Classification of Proteins)3J9M   
CATH (Classification of proteins structures)3J9M   
SuperfamilyO60783
Human Protein AtlasENSG00000120333
Peptide AtlasO60783
HPRD14777
IPIIPI00005050   IPI00976871   
Protein Interaction databases
DIP (DOE-UCLA)O60783
IntAct (EBI)O60783
FunCoupENSG00000120333
BioGRIDMRPS14
STRING (EMBL)MRPS14
ZODIACMRPS14
Ontologies - Pathways
QuickGOO60783
Ontology : AmiGORNA binding  structural constituent of ribosome  mitochondrial inner membrane  mitochondrial ribosome  mitochondrial small ribosomal subunit  mitochondrial small ribosomal subunit  translation  translation  mitochondrial translational elongation  mitochondrial translational termination  
Ontology : EGO-EBIRNA binding  structural constituent of ribosome  mitochondrial inner membrane  mitochondrial ribosome  mitochondrial small ribosomal subunit  mitochondrial small ribosomal subunit  translation  translation  mitochondrial translational elongation  mitochondrial translational termination  
Pathways : KEGGRibosome   
NDEx NetworkMRPS14
Atlas of Cancer Signalling NetworkMRPS14
Wikipedia pathwaysMRPS14
Orthology - Evolution
OrthoDB63931
GeneTree (enSembl)ENSG00000120333
Phylogenetic Trees/Animal Genes : TreeFamMRPS14
HOVERGENO60783
HOGENOMO60783
Homologs : HomoloGeneMRPS14
Homology/Alignments : Family Browser (UCSC)MRPS14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRPS14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRPS14
dbVarMRPS14
ClinVarMRPS14
1000_GenomesMRPS14 
Exome Variant ServerMRPS14
ExAC (Exome Aggregation Consortium)MRPS14 (select the gene name)
Genetic variants : HAPMAP63931
Genomic Variants (DGV)MRPS14 [DGVbeta]
DECIPHERMRPS14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMRPS14 
Mutations
ICGC Data PortalMRPS14 
TCGA Data PortalMRPS14 
Broad Tumor PortalMRPS14
OASIS PortalMRPS14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRPS14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRPS14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MRPS14
DgiDB (Drug Gene Interaction Database)MRPS14
DoCM (Curated mutations)MRPS14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRPS14 (select a term)
intoGenMRPS14
Cancer3DMRPS14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611978   
Orphanet
MedgenMRPS14
Genetic Testing Registry MRPS14
NextProtO60783 [Medical]
TSGene63931
GENETestsMRPS14
Target ValidationMRPS14
Huge Navigator MRPS14 [HugePedia]
snp3D : Map Gene to Disease63931
BioCentury BCIQMRPS14
ClinGenMRPS14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD63931
Chemical/Pharm GKB GenePA30998
Clinical trialMRPS14
Miscellaneous
canSAR (ICR)MRPS14 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRPS14
EVEXMRPS14
GoPubMedMRPS14
iHOPMRPS14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:15 CEST 2017

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