Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MRPS24 (mitochondrial ribosomal protein S24)

Identity

Alias_symbol (synonym)MRP-S24
HSPC335
Other aliasS24mt
bMRP-47
bMRP47
HGNC (Hugo) MRPS24
LocusID (NCBI) 64951
Atlas_Id 70482
Location 7p13  [Link to chromosome band 7p13]
Location_base_pair Starts at 43906157 and ends at 43909145 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
COA1 (7p13) / MRPS24 (7p13)HNRNPH1 (5q35.3) / MRPS24 (7p13)URGCP (7p13) / MRPS24 (7p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRPS24   14510
Cards
Entrez_Gene (NCBI)MRPS24  64951  mitochondrial ribosomal protein S24
AliasesHSPC335; MRP-S24; S24mt; bMRP-47; 
bMRP47
GeneCards (Weizmann)MRPS24
Ensembl hg19 (Hinxton)ENSG00000062582 [Gene_View]  chr7:43906157-43909145 [Contig_View]  MRPS24 [Vega]
Ensembl hg38 (Hinxton)ENSG00000062582 [Gene_View]  chr7:43906157-43909145 [Contig_View]  MRPS24 [Vega]
ICGC DataPortalENSG00000062582
TCGA cBioPortalMRPS24
AceView (NCBI)MRPS24
Genatlas (Paris)MRPS24
WikiGenes64951
SOURCE (Princeton)MRPS24
Genetics Home Reference (NIH)MRPS24
Genomic and cartography
GoldenPath hg19 (UCSC)MRPS24  -     chr7:43906157-43909145 -  7p13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MRPS24  -     7p13   [Description]    (hg38-Dec_2013)
EnsemblMRPS24 - 7p13 [CytoView hg19]  MRPS24 - 7p13 [CytoView hg38]
Mapping of homologs : NCBIMRPS24 [Mapview hg19]  MRPS24 [Mapview hg38]
OMIM611986   
Gene and transcription
Genbank (Entrez)AF161453 AK054982 BC012167 BC054865 CA413186
RefSeq transcript (Entrez)NM_032014
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)MRPS24
Cluster EST : UnigeneHs.284286 [ NCBI ]
CGAP (NCI)Hs.284286
Alternative Splicing GalleryENSG00000062582
Gene ExpressionMRPS24 [ NCBI-GEO ]   MRPS24 [ EBI - ARRAY_EXPRESS ]   MRPS24 [ SEEK ]   MRPS24 [ MEM ]
Gene Expression Viewer (FireBrowse)MRPS24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64951
GTEX Portal (Tissue expression)MRPS24
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96EL2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96EL2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96EL2
Splice isoforms : SwissVarQ96EL2
PhosPhoSitePlusQ96EL2
Domains : Interpro (EBI)MRPS24   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MRPS24
DMDM Disease mutations64951
Blocks (Seattle)MRPS24
SuperfamilyQ96EL2
Human Protein AtlasENSG00000062582
Peptide AtlasQ96EL2
HPRD17593
IPIIPI00101258   IPI00000181   IPI00926653   
Protein Interaction databases
DIP (DOE-UCLA)Q96EL2
IntAct (EBI)Q96EL2
FunCoupENSG00000062582
BioGRIDMRPS24
STRING (EMBL)MRPS24
ZODIACMRPS24
Ontologies - Pathways
QuickGOQ96EL2
Ontology : AmiGOstructural constituent of ribosome  mitochondrial inner membrane  mitochondrial small ribosomal subunit  mitochondrial small ribosomal subunit  organelle organization  biological_process  mitochondrial translation  mitochondrial translation  poly(A) RNA binding  mitochondrial translational initiation  mitochondrial translational elongation  mitochondrial translational termination  
Ontology : EGO-EBIstructural constituent of ribosome  mitochondrial inner membrane  mitochondrial small ribosomal subunit  mitochondrial small ribosomal subunit  organelle organization  biological_process  mitochondrial translation  mitochondrial translation  poly(A) RNA binding  mitochondrial translational initiation  mitochondrial translational elongation  mitochondrial translational termination  
NDEx NetworkMRPS24
Atlas of Cancer Signalling NetworkMRPS24
Wikipedia pathwaysMRPS24
Orthology - Evolution
OrthoDB64951
GeneTree (enSembl)ENSG00000062582
Phylogenetic Trees/Animal Genes : TreeFamMRPS24
HOVERGENQ96EL2
HOGENOMQ96EL2
Homologs : HomoloGeneMRPS24
Homology/Alignments : Family Browser (UCSC)MRPS24
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRPS24 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRPS24
dbVarMRPS24
ClinVarMRPS24
1000_GenomesMRPS24 
Exome Variant ServerMRPS24
ExAC (Exome Aggregation Consortium)MRPS24 (select the gene name)
Genetic variants : HAPMAP64951
Genomic Variants (DGV)MRPS24 [DGVbeta]
DECIPHER (Syndromes)7:43906157-43909145  ENSG00000062582
CONAN: Copy Number AnalysisMRPS24 
Mutations
ICGC Data PortalMRPS24 
TCGA Data PortalMRPS24 
Broad Tumor PortalMRPS24
OASIS PortalMRPS24 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRPS24  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRPS24
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MRPS24
DgiDB (Drug Gene Interaction Database)MRPS24
DoCM (Curated mutations)MRPS24 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRPS24 (select a term)
intoGenMRPS24
Cancer3DMRPS24(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611986   
Orphanet
MedgenMRPS24
Genetic Testing Registry MRPS24
NextProtQ96EL2 [Medical]
TSGene64951
GENETestsMRPS24
Huge Navigator MRPS24 [HugePedia]
snp3D : Map Gene to Disease64951
BioCentury BCIQMRPS24
ClinGenMRPS24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64951
Chemical/Pharm GKB GenePA31012
Clinical trialMRPS24
Miscellaneous
canSAR (ICR)MRPS24 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRPS24
EVEXMRPS24
GoPubMedMRPS24
iHOPMRPS24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:33:49 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.