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MRPS30-DT (MRPS30 divergent transcript)

Identity

Alias_symbol (synonym)BRCAT54
Other alias
HGNC (Hugo) MRPS30-DT
LocusID (NCBI) 100506674
Atlas_Id 79959
Location 5p12  [Link to chromosome band 5p12]
Location_base_pair Starts at 44744328 and ends at 44808793 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MRPS30-DT   53420
Cards
Entrez_Gene (NCBI)MRPS30-DT  100506674  MRPS30 divergent transcript
AliasesBRCAT54
GeneCards (Weizmann)MRPS30-DT
Ensembl hg19 (Hinxton)ENSG00000251141 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251141 [Gene_View]  ENSG00000251141 [Sequence]  chr5:44744328-44808793 [Contig_View]  MRPS30-DT [Vega]
ICGC DataPortalENSG00000251141
TCGA cBioPortalMRPS30-DT
AceView (NCBI)MRPS30-DT
Genatlas (Paris)MRPS30-DT
WikiGenes100506674
SOURCE (Princeton)MRPS30-DT
Genetics Home Reference (NIH)MRPS30-DT
Genomic and cartography
GoldenPath hg38 (UCSC)MRPS30-DT  -     chr5:44744328-44808793 -  5p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRPS30-DT  -     5p12   [Description]    (hg19-Feb_2009)
EnsemblMRPS30-DT - 5p12 [CytoView hg19]  MRPS30-DT - 5p12 [CytoView hg38]
Mapping of homologs : NCBIMRPS30-DT [Mapview hg19]  MRPS30-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL691871 BG612611 BM679915 BY797234 HY123663
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MRPS30-DT
Cluster EST : UnigeneHs.575213 [ NCBI ]
CGAP (NCI)Hs.575213
Alternative Splicing GalleryENSG00000251141
Gene ExpressionMRPS30-DT [ NCBI-GEO ]   MRPS30-DT [ EBI - ARRAY_EXPRESS ]   MRPS30-DT [ SEEK ]   MRPS30-DT [ MEM ]
Gene Expression Viewer (FireBrowse)MRPS30-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506674
GTEX Portal (Tissue expression)MRPS30-DT
Human Protein AtlasENSG00000251141-MRPS30-DT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MRPS30-DT
DMDM Disease mutations100506674
Blocks (Seattle)MRPS30-DT
Human Protein Atlas [tissue]ENSG00000251141-MRPS30-DT [tissue]
Protein Interaction databases
FunCoupENSG00000251141
BioGRIDMRPS30-DT
STRING (EMBL)MRPS30-DT
ZODIACMRPS30-DT
Ontologies - Pathways
Huge Navigator MRPS30-DT [HugePedia]
snp3D : Map Gene to Disease100506674
BioCentury BCIQMRPS30-DT
ClinGenMRPS30-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506674
Clinical trialMRPS30-DT
Miscellaneous
canSAR (ICR)MRPS30-DT (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRPS30-DT
EVEXMRPS30-DT
GoPubMedMRPS30-DT
iHOPMRPS30-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:18:40 CEST 2018

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