Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MRPS31 (mitochondrial ribosomal protein S31)

Identity

Alias (NCBI)IMOGN38
MRP-S31
S31mt
HGNC (Hugo) MRPS31
HGNC Alias symbIMOGN38
LocusID (NCBI) 10240
Atlas_Id 70486
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 40729128 and ends at 40771190 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AKAP11 (13q14.11) / MRPS31 (13q14.11)USP9X (Xp11.4) / MRPS31 (13q14.11)AKAP11 MRPS31
USP9X MRPS31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MRPS31   16632
Cards
Entrez_Gene (NCBI)MRPS31    mitochondrial ribosomal protein S31
AliasesIMOGN38; MRP-S31; S31mt
GeneCards (Weizmann)MRPS31
Ensembl hg19 (Hinxton)ENSG00000102738 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000102738 [Gene_View]  ENSG00000102738 [Sequence]  chr13:40729128-40771190 [Contig_View]  MRPS31 [Vega]
ICGC DataPortalENSG00000102738
TCGA cBioPortalMRPS31
AceView (NCBI)MRPS31
Genatlas (Paris)MRPS31
SOURCE (Princeton)MRPS31
Genetics Home Reference (NIH)MRPS31
Genomic and cartography
GoldenPath hg38 (UCSC)MRPS31  -     chr13:40729128-40771190 -  13q14.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRPS31  -     13q14.11   [Description]    (hg19-Feb_2009)
GoldenPathMRPS31 - 13q14.11 [CytoView hg19]  MRPS31 - 13q14.11 [CytoView hg38]
ImmunoBaseENSG00000102738
genome Data Viewer NCBIMRPS31 [Mapview hg19]  
OMIM611992   
Gene and transcription
Genbank (Entrez)AI343737 AI343739 AK315248 AV712217 BC010159
RefSeq transcript (Entrez)NM_005830
Consensus coding sequences : CCDS (NCBI)MRPS31
Alternative Splicing GalleryENSG00000102738
Gene ExpressionMRPS31 [ NCBI-GEO ]   MRPS31 [ EBI - ARRAY_EXPRESS ]   MRPS31 [ SEEK ]   MRPS31 [ MEM ]
Gene Expression Viewer (FireBrowse)MRPS31 [ Firebrowse - Broad ]
GenevisibleExpression of MRPS31 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10240
GTEX Portal (Tissue expression)MRPS31
Human Protein AtlasENSG00000102738-MRPS31 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ92665   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ92665  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ92665
PhosPhoSitePlusQ92665
Domains : Interpro (EBI)MRP-S31   
Domain families : Pfam (Sanger)MRP-S31 (PF15433)   
Domain families : Pfam (NCBI)pfam15433   
Conserved Domain (NCBI)MRPS31
PDB (RSDB)3J9M    6NU2    6NU3    6RW4    6RW5    6VLZ    6VMI    6ZS9    6ZSA    6ZSB    6ZSC    6ZSD    6ZSE    6ZSG   
PDB Europe3J9M    6NU2    6NU3    6RW4    6RW5    6VLZ    6VMI    6ZS9    6ZSA    6ZSB    6ZSC    6ZSD    6ZSE    6ZSG   
PDB (PDBSum)3J9M    6NU2    6NU3    6RW4    6RW5    6VLZ    6VMI    6ZS9    6ZSA    6ZSB    6ZSC    6ZSD    6ZSE    6ZSG   
PDB (IMB)3J9M    6NU2    6NU3    6RW4    6RW5    6VLZ    6VMI    6ZS9    6ZSA    6ZSB    6ZSC    6ZSD    6ZSE    6ZSG   
Structural Biology KnowledgeBase3J9M    6NU2    6NU3    6RW4    6RW5    6VLZ    6VMI    6ZS9    6ZSA    6ZSB    6ZSC    6ZSD    6ZSE    6ZSG   
SCOP (Structural Classification of Proteins)3J9M    6NU2    6NU3    6RW4    6RW5    6VLZ    6VMI    6ZS9    6ZSA    6ZSB    6ZSC    6ZSD    6ZSE    6ZSG   
CATH (Classification of proteins structures)3J9M    6NU2    6NU3    6RW4    6RW5    6VLZ    6VMI    6ZS9    6ZSA    6ZSB    6ZSC    6ZSD    6ZSE    6ZSG   
SuperfamilyQ92665
AlphaFold pdb e-kbQ92665   
Human Protein Atlas [tissue]ENSG00000102738-MRPS31 [tissue]
HPRD10098
Protein Interaction databases
DIP (DOE-UCLA)Q92665
IntAct (EBI)Q92665
BioGRIDMRPS31
STRING (EMBL)MRPS31
ZODIACMRPS31
Ontologies - Pathways
QuickGOQ92665
Ontology : AmiGORNA binding  structural constituent of ribosome  protein binding  nucleolus  mitochondrion  mitochondrial inner membrane  mitochondrial small ribosomal subunit  protein domain specific binding  mitochondrial translational elongation  mitochondrial translational termination  
Ontology : EGO-EBIRNA binding  structural constituent of ribosome  protein binding  nucleolus  mitochondrion  mitochondrial inner membrane  mitochondrial small ribosomal subunit  protein domain specific binding  mitochondrial translational elongation  mitochondrial translational termination  
NDEx NetworkMRPS31
Atlas of Cancer Signalling NetworkMRPS31
Wikipedia pathwaysMRPS31
Orthology - Evolution
OrthoDB10240
GeneTree (enSembl)ENSG00000102738
Phylogenetic Trees/Animal Genes : TreeFamMRPS31
Homologs : HomoloGeneMRPS31
Homology/Alignments : Family Browser (UCSC)MRPS31
Gene fusions - Rearrangements
Fusion PortalAKAP11 MRPS31
Fusion PortalUSP9X MRPS31
Fusion : QuiverMRPS31
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRPS31 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRPS31
dbVarMRPS31
ClinVarMRPS31
MonarchMRPS31
1000_GenomesMRPS31 
Exome Variant ServerMRPS31
GNOMAD BrowserENSG00000102738
Varsome BrowserMRPS31
Genomic Variants (DGV)MRPS31 [DGVbeta]
DECIPHERMRPS31 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMRPS31 
Mutations
ICGC Data PortalMRPS31 
TCGA Data PortalMRPS31 
Broad Tumor PortalMRPS31
OASIS PortalMRPS31 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRPS31  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMRPS31
Mutations and Diseases : HGMDMRPS31
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutasearch MRPS31
DgiDB (Drug Gene Interaction Database)MRPS31
DoCM (Curated mutations)MRPS31 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRPS31 (select a term)
Cancer3DMRPS31(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611992   
Orphanet
DisGeNETMRPS31
MedgenMRPS31
Genetic Testing Registry MRPS31
NextProtQ92665 [Medical]
GENETestsMRPS31
Target ValidationMRPS31
Huge Navigator MRPS31 [HugePedia]
ClinGenMRPS31
Clinical trials, drugs, therapy
MyCancerGenomeMRPS31
Protein Interactions : CTDMRPS31
Pharm GKB GenePA31019
PharosQ92665
Clinical trialMRPS31
Miscellaneous
canSAR (ICR)MRPS31
HarmonizomeMRPS31
DataMed IndexMRPS31
Probes
Litterature
PubMed66 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMRPS31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Sep 15 23:19:33 CEST 2021

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