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MRPS36 (mitochondrial ribosomal protein S36)

Identity

Alias_symbol (synonym)DC47
MRP-S36
Other alias
HGNC (Hugo) MRPS36
LocusID (NCBI) 92259
Atlas_Id 70490
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 68513573 and ends at 68525985 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRPS36   16631
Cards
Entrez_Gene (NCBI)MRPS36  92259  mitochondrial ribosomal protein S36
AliasesDC47; MRP-S36
GeneCards (Weizmann)MRPS36
Ensembl hg19 (Hinxton)ENSG00000134056 [Gene_View]  chr5:68513573-68525985 [Contig_View]  MRPS36 [Vega]
Ensembl hg38 (Hinxton)ENSG00000134056 [Gene_View]  chr5:68513573-68525985 [Contig_View]  MRPS36 [Vega]
ICGC DataPortalENSG00000134056
TCGA cBioPortalMRPS36
AceView (NCBI)MRPS36
Genatlas (Paris)MRPS36
WikiGenes92259
SOURCE (Princeton)MRPS36
Genetics Home Reference (NIH)MRPS36
Genomic and cartography
GoldenPath hg19 (UCSC)MRPS36  -     chr5:68513573-68525985 +  5q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MRPS36  -     5q13.2   [Description]    (hg38-Dec_2013)
EnsemblMRPS36 - 5q13.2 [CytoView hg19]  MRPS36 - 5q13.2 [CytoView hg38]
Mapping of homologs : NCBIMRPS36 [Mapview hg19]  MRPS36 [Mapview hg38]
OMIM611996   
Gene and transcription
Genbank (Entrez)AA780181 AF086034 AF271777 AL529370 BC015966
RefSeq transcript (Entrez)NM_033281
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_003315917 NW_004929322
Consensus coding sequences : CCDS (NCBI)MRPS36
Cluster EST : UnigeneHs.631971 [ NCBI ]
CGAP (NCI)Hs.631971
Alternative Splicing GalleryENSG00000134056
Gene ExpressionMRPS36 [ NCBI-GEO ]   MRPS36 [ EBI - ARRAY_EXPRESS ]   MRPS36 [ SEEK ]   MRPS36 [ MEM ]
Gene Expression Viewer (FireBrowse)MRPS36 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)92259
GTEX Portal (Tissue expression)MRPS36
Protein : pattern, domain, 3D structure
UniProt/SwissProtP82909   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP82909  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP82909
Splice isoforms : SwissVarP82909
PhosPhoSitePlusP82909
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MRPS36
DMDM Disease mutations92259
Blocks (Seattle)MRPS36
SuperfamilyP82909
Human Protein AtlasENSG00000134056
Peptide AtlasP82909
HPRD17600
IPIIPI00020495   IPI00966160   
Protein Interaction databases
DIP (DOE-UCLA)P82909
IntAct (EBI)P82909
FunCoupENSG00000134056
BioGRIDMRPS36
STRING (EMBL)MRPS36
ZODIACMRPS36
Ontologies - Pathways
QuickGOP82909
Ontology : AmiGOstructural constituent of ribosome  mitochondrion  mitochondrion  mitochondrial inner membrane  mitochondrial small ribosomal subunit  translation  organelle organization  mitochondrial translation  mitochondrial translational initiation  mitochondrial translational elongation  mitochondrial translational termination  
Ontology : EGO-EBIstructural constituent of ribosome  mitochondrion  mitochondrion  mitochondrial inner membrane  mitochondrial small ribosomal subunit  translation  organelle organization  mitochondrial translation  mitochondrial translational initiation  mitochondrial translational elongation  mitochondrial translational termination  
NDEx NetworkMRPS36
Atlas of Cancer Signalling NetworkMRPS36
Wikipedia pathwaysMRPS36
Orthology - Evolution
OrthoDB92259
GeneTree (enSembl)ENSG00000134056
Phylogenetic Trees/Animal Genes : TreeFamMRPS36
HOVERGENP82909
HOGENOMP82909
Homologs : HomoloGeneMRPS36
Homology/Alignments : Family Browser (UCSC)MRPS36
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRPS36 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRPS36
dbVarMRPS36
ClinVarMRPS36
1000_GenomesMRPS36 
Exome Variant ServerMRPS36
ExAC (Exome Aggregation Consortium)MRPS36 (select the gene name)
Genetic variants : HAPMAP92259
Genomic Variants (DGV)MRPS36 [DGVbeta]
DECIPHER (Syndromes)5:68513573-68525985  ENSG00000134056
CONAN: Copy Number AnalysisMRPS36 
Mutations
ICGC Data PortalMRPS36 
TCGA Data PortalMRPS36 
Broad Tumor PortalMRPS36
OASIS PortalMRPS36 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRPS36  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRPS36
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MRPS36
DgiDB (Drug Gene Interaction Database)MRPS36
DoCM (Curated mutations)MRPS36 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRPS36 (select a term)
intoGenMRPS36
Cancer3DMRPS36(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611996   
Orphanet
MedgenMRPS36
Genetic Testing Registry MRPS36
NextProtP82909 [Medical]
TSGene92259
GENETestsMRPS36
Huge Navigator MRPS36 [HugePedia]
snp3D : Map Gene to Disease92259
BioCentury BCIQMRPS36
ClinGenMRPS36
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD92259
Chemical/Pharm GKB GenePA31023
Clinical trialMRPS36
Miscellaneous
canSAR (ICR)MRPS36 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRPS36
EVEXMRPS36
GoPubMedMRPS36
iHOPMRPS36
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:33:51 CET 2017

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