Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MRPS36 (mitochondrial ribosomal protein S36)

Identity

Alias (NCBI)DC47
MRP-S36
HGNC (Hugo) MRPS36
HGNC Alias symbDC47
MRP-S36
LocusID (NCBI) 92259
Atlas_Id 70490
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 69217760 and ends at 69230158 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)MRPS36   16631
Cards
Entrez_Gene (NCBI)MRPS36    mitochondrial ribosomal protein S36
AliasesDC47; MRP-S36
GeneCards (Weizmann)MRPS36
Ensembl hg19 (Hinxton)ENSG00000134056 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134056 [Gene_View]  ENSG00000134056 [Sequence]  chr5:69217760-69230158 [Contig_View]  MRPS36 [Vega]
ICGC DataPortalENSG00000134056
TCGA cBioPortalMRPS36
AceView (NCBI)MRPS36
Genatlas (Paris)MRPS36
SOURCE (Princeton)MRPS36
Genetics Home Reference (NIH)MRPS36
Genomic and cartography
GoldenPath hg38 (UCSC)MRPS36  -     chr5:69217760-69230158 +  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MRPS36  -     5q13.2   [Description]    (hg19-Feb_2009)
GoldenPathMRPS36 - 5q13.2 [CytoView hg19]  MRPS36 - 5q13.2 [CytoView hg38]
ImmunoBaseENSG00000134056
Genome Data Viewer NCBIMRPS36 [Mapview hg19]  
OMIM611996   
Gene and transcription
Genbank (Entrez)AA780181 AF086034 AF271777 AL529370 BC015966
RefSeq transcript (Entrez)NM_033281
Consensus coding sequences : CCDS (NCBI)MRPS36
Gene ExpressionMRPS36 [ NCBI-GEO ]   MRPS36 [ EBI - ARRAY_EXPRESS ]   MRPS36 [ SEEK ]   MRPS36 [ MEM ]
Gene Expression Viewer (FireBrowse)MRPS36 [ Firebrowse - Broad ]
GenevisibleExpression of MRPS36 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)92259
GTEX Portal (Tissue expression)MRPS36
Human Protein AtlasENSG00000134056-MRPS36 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP82909   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP82909  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP82909
PhosPhoSitePlusP82909
Domains : Interpro (EBI)Ribosomal_S36_mt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MRPS36
SuperfamilyP82909
AlphaFold pdb e-kbP82909   
Human Protein Atlas [tissue]ENSG00000134056-MRPS36 [tissue]
HPRD17600
Protein Interaction databases
DIP (DOE-UCLA)P82909
IntAct (EBI)P82909
BioGRIDMRPS36
STRING (EMBL)MRPS36
ZODIACMRPS36
Ontologies - Pathways
QuickGOP82909
Ontology : AmiGOstructural constituent of ribosome  mitochondrion  mitochondrion  mitochondrial inner membrane  mitochondrial small ribosomal subunit  2-oxoglutarate metabolic process  translation  mitochondrial oxoglutarate dehydrogenase complex  mitochondrial translational elongation  mitochondrial translational termination  
Ontology : EGO-EBIstructural constituent of ribosome  mitochondrion  mitochondrion  mitochondrial inner membrane  mitochondrial small ribosomal subunit  2-oxoglutarate metabolic process  translation  mitochondrial oxoglutarate dehydrogenase complex  mitochondrial translational elongation  mitochondrial translational termination  
NDEx NetworkMRPS36
Atlas of Cancer Signalling NetworkMRPS36
Wikipedia pathwaysMRPS36
Orthology - Evolution
OrthoDB92259
GeneTree (enSembl)ENSG00000134056
Phylogenetic Trees/Animal Genes : TreeFamMRPS36
Homologs : HomoloGeneMRPS36
Homology/Alignments : Family Browser (UCSC)MRPS36
Gene fusions - Rearrangements
Fusion : QuiverMRPS36
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRPS36 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRPS36
dbVarMRPS36
ClinVarMRPS36
MonarchMRPS36
1000_GenomesMRPS36 
Exome Variant ServerMRPS36
GNOMAD BrowserENSG00000134056
Varsome BrowserMRPS36
ACMGMRPS36 variants
VarityP82909
Genomic Variants (DGV)MRPS36 [DGVbeta]
DECIPHERMRPS36 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMRPS36 
Mutations
ICGC Data PortalMRPS36 
TCGA Data PortalMRPS36 
Broad Tumor PortalMRPS36
OASIS PortalMRPS36 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRPS36  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMRPS36
Mutations and Diseases : HGMDMRPS36
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMRPS36
DgiDB (Drug Gene Interaction Database)MRPS36
DoCM (Curated mutations)MRPS36
CIViC (Clinical Interpretations of Variants in Cancer)MRPS36
Cancer3DMRPS36
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611996   
Orphanet
DisGeNETMRPS36
MedgenMRPS36
Genetic Testing Registry MRPS36
NextProtP82909 [Medical]
GENETestsMRPS36
Target ValidationMRPS36
Huge Navigator MRPS36 [HugePedia]
ClinGenMRPS36
Clinical trials, drugs, therapy
MyCancerGenomeMRPS36
Protein Interactions : CTDMRPS36
Pharm GKB GenePA31023
PharosP82909
Clinical trialMRPS36
Miscellaneous
canSAR (ICR)MRPS36
HarmonizomeMRPS36
ARCHS4MRPS36
DataMed IndexMRPS36
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMRPS36
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 19:15:14 CET 2022

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