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MRRF (mitochondrial ribosome recycling factor)

Identity

Alias_symbol (synonym)RRF
Other aliasMRFF
MTRRF
HGNC (Hugo) MRRF
LocusID (NCBI) 92399
Atlas_Id 70495
Location 9q33.2  [Link to chromosome band 9q33]
Location_base_pair Starts at 125026882 and ends at 125085742 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
IKBKAP (9q31.3) / MRRF (9q33.2)MRRF (9q33.2) / IKBKAP (9q31.3)MRRF (9q33.2) / KIAA0368 (9q31.3)
MRRF (9q33.2) / MORN5 (9q33.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MRRF   7234
Cards
Entrez_Gene (NCBI)MRRF  92399  mitochondrial ribosome recycling factor
AliasesMRFF; MTRRF; RRF
GeneCards (Weizmann)MRRF
Ensembl hg19 (Hinxton)ENSG00000148187 [Gene_View]  chr9:125026882-125085742 [Contig_View]  MRRF [Vega]
Ensembl hg38 (Hinxton)ENSG00000148187 [Gene_View]  chr9:125026882-125085742 [Contig_View]  MRRF [Vega]
ICGC DataPortalENSG00000148187
TCGA cBioPortalMRRF
AceView (NCBI)MRRF
Genatlas (Paris)MRRF
WikiGenes92399
SOURCE (Princeton)MRRF
Genetics Home Reference (NIH)MRRF
Genomic and cartography
GoldenPath hg19 (UCSC)MRRF  -     chr9:125026882-125085742 +  9q33.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MRRF  -     9q33.2   [Description]    (hg38-Dec_2013)
EnsemblMRRF - 9q33.2 [CytoView hg19]  MRRF - 9q33.2 [CytoView hg38]
Mapping of homologs : NCBIMRRF [Mapview hg19]  MRRF [Mapview hg38]
OMIM604602   
Gene and transcription
Genbank (Entrez)AK291603 AK291809 AK292790 AK298046 AK300718
RefSeq transcript (Entrez)NM_001173512 NM_138777 NM_199176 NM_199177
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)MRRF
Cluster EST : UnigeneHs.368011 [ NCBI ]
CGAP (NCI)Hs.368011
Alternative Splicing GalleryENSG00000148187
Gene ExpressionMRRF [ NCBI-GEO ]   MRRF [ EBI - ARRAY_EXPRESS ]   MRRF [ SEEK ]   MRRF [ MEM ]
Gene Expression Viewer (FireBrowse)MRRF [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)92399
GTEX Portal (Tissue expression)MRRF
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96E11   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96E11  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96E11
Splice isoforms : SwissVarQ96E11
PhosPhoSitePlusQ96E11
Domains : Interpro (EBI)Arg_repress_C-like    Ribosome_recyc_fac    Ribosome_recyc_fac_dom   
Domain families : Pfam (Sanger)RRF (PF01765)   
Domain families : Pfam (NCBI)pfam01765   
Conserved Domain (NCBI)MRRF
DMDM Disease mutations92399
Blocks (Seattle)MRRF
SuperfamilyQ96E11
Human Protein AtlasENSG00000148187
Peptide AtlasQ96E11
HPRD06856
IPIIPI00061108   IPI00412392   IPI00556600   IPI00514034   IPI00556454   IPI00030596   IPI00555800   IPI00921950   
Protein Interaction databases
DIP (DOE-UCLA)Q96E11
IntAct (EBI)Q96E11
FunCoupENSG00000148187
BioGRIDMRRF
STRING (EMBL)MRRF
ZODIACMRRF
Ontologies - Pathways
QuickGOQ96E11
Ontology : AmiGOmitochondrial matrix  organelle organization  mitochondrial translation  ribosome disassembly  mitochondrial translational termination  
Ontology : EGO-EBImitochondrial matrix  organelle organization  mitochondrial translation  ribosome disassembly  mitochondrial translational termination  
NDEx NetworkMRRF
Atlas of Cancer Signalling NetworkMRRF
Wikipedia pathwaysMRRF
Orthology - Evolution
OrthoDB92399
GeneTree (enSembl)ENSG00000148187
Phylogenetic Trees/Animal Genes : TreeFamMRRF
HOVERGENQ96E11
HOGENOMQ96E11
Homologs : HomoloGeneMRRF
Homology/Alignments : Family Browser (UCSC)MRRF
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMRRF [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MRRF
dbVarMRRF
ClinVarMRRF
1000_GenomesMRRF 
Exome Variant ServerMRRF
ExAC (Exome Aggregation Consortium)MRRF (select the gene name)
Genetic variants : HAPMAP92399
Genomic Variants (DGV)MRRF [DGVbeta]
DECIPHER (Syndromes)9:125026882-125085742  ENSG00000148187
CONAN: Copy Number AnalysisMRRF 
Mutations
ICGC Data PortalMRRF 
TCGA Data PortalMRRF 
Broad Tumor PortalMRRF
OASIS PortalMRRF [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMRRF  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMRRF
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch MRRF
DgiDB (Drug Gene Interaction Database)MRRF
DoCM (Curated mutations)MRRF (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MRRF (select a term)
intoGenMRRF
Cancer3DMRRF(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604602   
Orphanet
MedgenMRRF
Genetic Testing Registry MRRF
NextProtQ96E11 [Medical]
TSGene92399
GENETestsMRRF
Huge Navigator MRRF [HugePedia]
snp3D : Map Gene to Disease92399
BioCentury BCIQMRRF
ClinGenMRRF
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD92399
Chemical/Pharm GKB GenePA31029
Clinical trialMRRF
Miscellaneous
canSAR (ICR)MRRF (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMRRF
EVEXMRRF
GoPubMedMRRF
iHOPMRRF
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:33:52 CET 2017

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