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MSLN (mesothelin)

Identity

Alias (NCBI)MPF
SMRP
HGNC (Hugo) MSLN
HGNC Alias symbCAK1
MPF
LocusID (NCBI) 10232
Atlas_Id 41433
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 761073 and ends at 768865 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MSLN   7371
Cards
Entrez_Gene (NCBI)MSLN    mesothelin
AliasesMPF; SMRP
GeneCards (Weizmann)MSLN
Ensembl hg19 (Hinxton)ENSG00000102854 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000102854 [Gene_View]  ENSG00000102854 [Sequence]  chr16:761073-768865 [Contig_View]  MSLN [Vega]
ICGC DataPortalENSG00000102854
TCGA cBioPortalMSLN
AceView (NCBI)MSLN
Genatlas (Paris)MSLN
SOURCE (Princeton)MSLN
Genetics Home Reference (NIH)MSLN
Genomic and cartography
GoldenPath hg38 (UCSC)MSLN  -     chr16:761073-768865 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MSLN  -     16p13.3   [Description]    (hg19-Feb_2009)
GoldenPathMSLN - 16p13.3 [CytoView hg19]  MSLN - 16p13.3 [CytoView hg38]
ImmunoBaseENSG00000102854
Genome Data Viewer NCBIMSLN [Mapview hg19]  
OMIM601051   
Gene and transcription
Genbank (Entrez)AF180951 AL545401 AY743922 BC003512 BC009272
RefSeq transcript (Entrez)NM_001177355 NM_005823 NM_013404
Consensus coding sequences : CCDS (NCBI)MSLN
Gene ExpressionMSLN [ NCBI-GEO ]   MSLN [ EBI - ARRAY_EXPRESS ]   MSLN [ SEEK ]   MSLN [ MEM ]
Gene Expression Viewer (FireBrowse)MSLN [ Firebrowse - Broad ]
GenevisibleExpression of MSLN in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10232
GTEX Portal (Tissue expression)MSLN
Human Protein AtlasENSG00000102854-MSLN [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MSLN
Human Protein Atlas [tissue]ENSG00000102854-MSLN [tissue]
HPRD03030
Protein Interaction databases
BioGRIDMSLN
STRING (EMBL)MSLN
ZODIACMSLN
Ontologies - Pathways
Litterature
PubMed154 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMSLN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:21:24 CEST 2021

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