Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MSMB (microseminoprotein, beta-)

Identity

Other namesHPC13
IGBF
MSP
MSPB
PN44
PRPS
PSP
PSP-94
PSP57
PSP94
HGNC (Hugo) MSMB
Location 10q11.23
Location_base_pair Starts at 51549552 and ends at 51562398 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MSMB   7372
Entrez_Gene (NCBI)MSMB  4477  microseminoprotein, beta-
Cards
GeneCards (Weizmann)MSMB
Ensembl (Hinxton)ENSG00000138294 [Gene_View]  MSMB [Vega]
AceView (NCBI)MSMB
Genatlas (Paris)MSMB
euGene (Indiana)4477
SOURCE (Stanford)NM_002443 NM_138634
Gene Expression (Array Express) ENSG00000138294
Genomic and cartography
GoldenPath (UCSC)MSMB  -  10q11.23   chr10:51549552-51562398 +  10q11.23   [Description]    (hg19-Feb_2009)
EnsemblMSMB - 10q11.23 [CytoView]
Mapping of homologs : NCBIMSMB [Mapview]
OMIM157145   611928   
Gene and transcription
Gene : Genbank (Entrez)AK312108 BC005257 BT006816 CR457015 DQ892498
Reference sequence (RefSeq transcript) :SRSNM_002443 NM_138634
Reference transcript : EntrezNM_002443 NM_138634
RefSeq genomic : SRSAC_000053 AC_000142 NC_000010 NG_011551 NT_030059 NW_001837979 NW_924672
RefSeq genomic : EntrezAC_000053 AC_000142 NC_000010 NG_011551 NT_030059 NW_001837979 NW_924672
Consensus coding sequences : CCDS NCBIMSMB
Cluster EST : UnigeneHs.255462 [ SRS ] Hs.255462 [ NCBI ]
Alternative Splicing : Fast-db (Paris)10327
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtP08118 (SRS) P08118 (Expasy) P08118 (Uniprot)
With graphics : InterProP08118
Splice isoforms : VarSplice FASTAP08118(VarSplice FASTA)
Domains : Interpro (SRS)PSP94   
Domains : Interpro (EBI)PSP94   
Related proteins : CluSTrP08118
Domain families : Pfam SRSPSP94 (PF05825)   
Domain families : Pfam SangerPSP94 (PF05825)   
Domain families : Pfam NCBIpfam05825   
Blocks (Seattle)P08118
Crystal structure of protein : PDB SRS2IZ3    3IX0   
Crystal structure of protein : PDBSum2IZ3    3IX0   
Crystal structure of protein : IMB2IZ3    3IX0   
Crystal structure of protein : PDB RSDB2IZ3    3IX0   
Human Protein AtlasENSG00000138294
HPRD01143
Protein Interaction databases
DIP (DOE-UCLA)P08118
IntAct (EBI)P08118
FunCoupENSG00000138294
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIMSMB
SNP : GeneSNP UtahMSMB
SNP : HGBaseMSMB
Genetic variants : HAPMAPMSMB
Somatic Mutations in Cancer : COSMICMSMB 
Mutations and Diseases : HGMDMSMB
Hereditary diseases : OMIM157145    611928   
Hereditary diseases : GENETests157145    611928   
Diseases : Genetic AssociationMSMB
General knowledge
Homologs : HomoloGeneMSMB
Homology/Alignments : Family Browser UCSCMSMB
Phylogenetic Trees/Animal Genes : TreeFamMSMB
Chemical/Protein Interactions : CTD4477
Keywords Ontology : AmiGOmolecular_function  extracellular region  extracellular space  nucleus  biological_process  
Keywords Ontology : EGO-EBImolecular_function  extracellular region  extracellular space  nucleus  biological_process  
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesMSMB Related clones (RZPD - Berlin)
Literature
PubMed55 Pubmed reference(s) in Entrez
PubGeneMSMB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated07-2010Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 31 19:59:52 CEST 2010
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