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MST1L (macrophage stimulating 1 like)

Identity

Alias_namesMSTP7
MSTP9
MST1P9
macrophage stimulating, pseudogene 7
macrophage stimulating, pseudogene 9
macrophage stimulating 1 (hepatocyte growth factor-like) pseudogene 9
Alias_symbol (synonym)D1F15S1A
MSPL7
MSPL-7
Other aliasBRF-1
HGNC (Hugo) MST1L
LocusID (NCBI) 11223
Atlas_Id 70523
Location 1p36.13  [Link to chromosome band 1p36]
Location_base_pair Starts at 16754634 and ends at 16764480 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MST1L (1p36.13) / MST1 (3p21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MST1L   7390
Cards
Entrez_Gene (NCBI)MST1L  11223  macrophage stimulating 1 like
AliasesBRF-1; D1F15S1A; MSPL-7; MSPL7; 
MST1P9; MSTP7; MSTP9
GeneCards (Weizmann)MST1L
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:16754634-16764480 [Contig_View]  MST1L [Vega]
TCGA cBioPortalMST1L
AceView (NCBI)MST1L
Genatlas (Paris)MST1L
WikiGenes11223
SOURCE (Princeton)MST1L
Genetics Home Reference (NIH)MST1L
Genomic and cartography
GoldenPath hg38 (UCSC)MST1L  -     chr1:16754634-16764480 -  1p36.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MST1L  -     1p36.13   [Description]    (hg19-Feb_2009)
EnsemblMST1L - 1p36.13 [CytoView hg19]  MST1L - 1p36.13 [CytoView hg38]
Mapping of homologs : NCBIMST1L [Mapview hg19]  MST1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF116647 AY192149 U28055
RefSeq transcript (Entrez)NM_001271733
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MST1L
Cluster EST : UnigeneHs.655432 [ NCBI ]
CGAP (NCI)Hs.655432
Gene ExpressionMST1L [ NCBI-GEO ]   MST1L [ EBI - ARRAY_EXPRESS ]   MST1L [ SEEK ]   MST1L [ MEM ]
Gene Expression Viewer (FireBrowse)MST1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11223
GTEX Portal (Tissue expression)MST1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2TV78   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2TV78  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2TV78
Splice isoforms : SwissVarQ2TV78
PhosPhoSitePlusQ2TV78
Domaine pattern : Prosite (Expaxy)KRINGLE_1 (PS00021)    KRINGLE_2 (PS50070)    PAN (PS50948)    TRYPSIN_DOM (PS50240)   
Domains : Interpro (EBI)Kringle    Kringle-like    Kringle_CS    Pan_app    Peptidase_S1_PA    Peptidase_S1A    Trypsin_dom   
Domain families : Pfam (Sanger)Kringle (PF00051)    PAN_1 (PF00024)    Trypsin (PF00089)   
Domain families : Pfam (NCBI)pfam00051    pfam00024    pfam00089   
Domain families : Smart (EMBL)KR (SM00130)  PAN_AP (SM00473)  Tryp_SPc (SM00020)  
Conserved Domain (NCBI)MST1L
DMDM Disease mutations11223
Blocks (Seattle)MST1L
SuperfamilyQ2TV78
Peptide AtlasQ2TV78
IPIIPI00902670   IPI00718805   IPI00908726   IPI01014169   
Protein Interaction databases
DIP (DOE-UCLA)Q2TV78
IntAct (EBI)Q2TV78
BioGRIDMST1L
STRING (EMBL)MST1L
ZODIACMST1L
Ontologies - Pathways
QuickGOQ2TV78
Ontology : AmiGOserine-type endopeptidase activity  extracellular region  proteolysis  
Ontology : EGO-EBIserine-type endopeptidase activity  extracellular region  proteolysis  
NDEx NetworkMST1L
Atlas of Cancer Signalling NetworkMST1L
Wikipedia pathwaysMST1L
Orthology - Evolution
OrthoDB11223
Phylogenetic Trees/Animal Genes : TreeFamMST1L
HOVERGENQ2TV78
HOGENOMQ2TV78
Homologs : HomoloGeneMST1L
Homology/Alignments : Family Browser (UCSC)MST1L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMST1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MST1L
dbVarMST1L
ClinVarMST1L
1000_GenomesMST1L 
Exome Variant ServerMST1L
ExAC (Exome Aggregation Consortium)MST1L (select the gene name)
Genetic variants : HAPMAP11223
Genomic Variants (DGV)MST1L [DGVbeta]
DECIPHERMST1L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMST1L 
Mutations
ICGC Data PortalMST1L 
TCGA Data PortalMST1L 
Broad Tumor PortalMST1L
OASIS PortalMST1L [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMST1L
BioMutasearch MST1L
DgiDB (Drug Gene Interaction Database)MST1L
DoCM (Curated mutations)MST1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MST1L (select a term)
intoGenMST1L
Cancer3DMST1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMST1L
Genetic Testing Registry MST1L
NextProtQ2TV78 [Medical]
TSGene11223
GENETestsMST1L
Target ValidationMST1L
Huge Navigator MST1L [HugePedia]
snp3D : Map Gene to Disease11223
BioCentury BCIQMST1L
ClinGenMST1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11223
Chemical/Pharm GKB GenePA31195
Clinical trialMST1L
Miscellaneous
canSAR (ICR)MST1L (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMST1L
EVEXMST1L
GoPubMedMST1L
iHOPMST1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:31:45 CEST 2017

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