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MSX2P1 (msh homeobox 2 pseudogene 1)

Identity

Alias_namesMSX2P
msh homeobox 2 pseudogene
Alias_symbol (synonym)HSHPX5
HPX5
Other alias
HGNC (Hugo) MSX2P1
LocusID (NCBI) 55545
Atlas_Id 70527
Location 17q22  [Link to chromosome band 17q22]
Location_base_pair Starts at 58156959 and ends at 58159119 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MSX2P1   24976
Cards
Entrez_Gene (NCBI)MSX2P1  55545  msh homeobox 2 pseudogene 1
AliasesHPX5; HSHPX5; MSX2P
GeneCards (Weizmann)MSX2P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:58156959-58159119 [Contig_View]  MSX2P1 [Vega]
TCGA cBioPortalMSX2P1
AceView (NCBI)MSX2P1
Genatlas (Paris)MSX2P1
WikiGenes55545
SOURCE (Princeton)MSX2P1
Genetics Home Reference (NIH)MSX2P1
Genomic and cartography
GoldenPath hg38 (UCSC)MSX2P1  -     chr17:58156959-58159119 +  17q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MSX2P1  -     17q22   [Description]    (hg19-Feb_2009)
EnsemblMSX2P1 - 17q22 [CytoView hg19]  MSX2P1 - 17q22 [CytoView hg38]
Mapping of homologs : NCBIMSX2P1 [Mapview hg19]  MSX2P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)X74862
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MSX2P1
Cluster EST : UnigeneHs.381329 [ NCBI ]
CGAP (NCI)Hs.381329
Gene ExpressionMSX2P1 [ NCBI-GEO ]   MSX2P1 [ EBI - ARRAY_EXPRESS ]   MSX2P1 [ SEEK ]   MSX2P1 [ MEM ]
Gene Expression Viewer (FireBrowse)MSX2P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)55545
GTEX Portal (Tissue expression)MSX2P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MSX2P1
DMDM Disease mutations55545
Blocks (Seattle)MSX2P1
IPIIPI00867709   
Protein Interaction databases
BioGRIDMSX2P1
STRING (EMBL)MSX2P1
ZODIACMSX2P1
Ontologies - Pathways
Huge Navigator MSX2P1 [HugePedia]
snp3D : Map Gene to Disease55545
BioCentury BCIQMSX2P1
ClinGenMSX2P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55545
Clinical trialMSX2P1
Miscellaneous
canSAR (ICR)MSX2P1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMSX2P1
EVEXMSX2P1
GoPubMedMSX2P1
iHOPMSX2P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:44:03 CEST 2017

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