Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MT1JP (metallothionein 1J, pseudogene)

Identity

Alias_namesMT1
MT1NP
MT1J
metallothionein 1N, pseudogene
metallothionein 1J
Alias_symbol (synonym)MTB
Other alias
HGNC (Hugo) MT1JP
LocusID (NCBI) 4498
Atlas_Id 70532
Location 16q12.2  [Link to chromosome band 16q12]
Location_base_pair Starts at 56669651 and ends at 56670998 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MT1JP   7402
Cards
Entrez_Gene (NCBI)MT1JP  4498  metallothionein 1J, pseudogene
AliasesMT1; MT1J; MT1NP; MTB
GeneCards (Weizmann)MT1JP
Ensembl hg19 (Hinxton)ENSG00000255986 [Gene_View]  chr16:56669651-56670998 [Contig_View]  MT1JP [Vega]
Ensembl hg38 (Hinxton)ENSG00000255986 [Gene_View]  chr16:56669651-56670998 [Contig_View]  MT1JP [Vega]
ICGC DataPortalENSG00000255986
TCGA cBioPortalMT1JP
AceView (NCBI)MT1JP
Genatlas (Paris)MT1JP
WikiGenes4498
SOURCE (Princeton)MT1JP
Genetics Home Reference (NIH)MT1JP
Genomic and cartography
GoldenPath hg19 (UCSC)MT1JP  -     chr16:56669651-56670998 +  16q12.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MT1JP  -     16q12.2   [Description]    (hg38-Dec_2013)
EnsemblMT1JP - 16q12.2 [CytoView hg19]  MT1JP - 16q12.2 [CytoView hg38]
Mapping of homologs : NCBIMT1JP [Mapview hg19]  MT1JP [Mapview hg38]
OMIM156356   
Gene and transcription
Genbank (Entrez)AF348994 BC103839
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NG_005506 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)MT1JP
Cluster EST : UnigeneHs.736648 [ NCBI ]
CGAP (NCI)Hs.736648
Alternative Splicing GalleryENSG00000255986
Gene ExpressionMT1JP [ NCBI-GEO ]   MT1JP [ EBI - ARRAY_EXPRESS ]   MT1JP [ SEEK ]   MT1JP [ MEM ]
Gene Expression Viewer (FireBrowse)MT1JP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)4498
GTEX Portal (Tissue expression)MT1JP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MT1JP
DMDM Disease mutations4498
Blocks (Seattle)MT1JP
Human Protein AtlasENSG00000255986
HPRD11758
Protein Interaction databases
FunCoupENSG00000255986
BioGRIDMT1JP
STRING (EMBL)MT1JP
ZODIACMT1JP
Ontologies - Pathways
Huge Navigator MT1JP [HugePedia]
snp3D : Map Gene to Disease4498
BioCentury BCIQMT1JP
ClinGenMT1JP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4498
Chemical/Pharm GKB GenePA31207
Clinical trialMT1JP
Miscellaneous
canSAR (ICR)MT1JP (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMT1JP
EVEXMT1JP
GoPubMedMT1JP
iHOPMT1JP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:34:00 CET 2017

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