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MTBP (MDM2 binding protein)

Identity

Other namesMDM2BP
HGNC (Hugo) MTBP
LocusID (NCBI) 27085
Location 8q24.12
Location_base_pair Starts at 121457638 and ends at 121535875 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MTBP   7417
Cards
Entrez_Gene (NCBI)MTBP  27085  MDM2 binding protein
GeneCards (Weizmann)MTBP
Ensembl (Hinxton)ENSG00000172167 [Gene_View]  chr8:121457638-121535875 [Contig_View]  MTBP [Vega]
ICGC DataPortalENSG00000172167
AceView (NCBI)MTBP
Genatlas (Paris)MTBP
WikiGenes27085
SOURCE (Princeton)NM_022045
Genomic and cartography
GoldenPath (UCSC)MTBP  -  8q24.12   chr8:121457638-121535875 +  8q24.12   [Description]    (hg19-Feb_2009)
EnsemblMTBP - 8q24.12 [CytoView]
Mapping of homologs : NCBIMTBP [Mapview]
OMIM605927   
Gene and transcription
Genbank (Entrez)AK022122 AK300762 AL832671 BC013136 EU176294
RefSeq transcript (Entrez)NM_022045
RefSeq genomic (Entrez)AC_000140 NC_000008 NC_018919 NG_033151 NT_008046 NW_001839136 NW_004929340
Consensus coding sequences : CCDS (NCBI)MTBP
Cluster EST : UnigeneHs.657656 [ NCBI ]
CGAP (NCI)Hs.657656
Alternative Splicing : Fast-db (Paris)GSHG0029218
Alternative Splicing GalleryENSG00000172167
Gene ExpressionMTBP [ NCBI-GEO ]     MTBP [ SEEK ]   MTBP [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96DY7 (Uniprot)
NextProtQ96DY7  [Medical]
With graphics : InterProQ96DY7
Splice isoforms : SwissVarQ96DY7 (Swissvar)
Domains : Interpro (EBI)MTBP_C    MTBP_central    MTBP_N   
Related proteins : CluSTrQ96DY7
Domain families : Pfam (Sanger)MTBP_C (PF14920)    MTBP_mid (PF14919)    MTBP_N (PF14918)   
Domain families : Pfam (NCBI)pfam14920    pfam14919    pfam14918   
DMDM Disease mutations27085
Blocks (Seattle)Q96DY7
Human Protein AtlasENSG00000172167
Peptide AtlasQ96DY7
HPRD12068
IPIIPI00061277   IPI01010285   IPI00975810   
Protein Interaction databases
DIP (DOE-UCLA)Q96DY7
IntAct (EBI)Q96DY7
FunCoupENSG00000172167
BioGRIDMTBP
IntegromeDBMTBP
STRING (EMBL)MTBP
Ontologies - Pathways
QuickGOQ96DY7
Ontology : AmiGOkinetochore  chromatin  cell cycle arrest  traversing start control point of mitotic cell cycle  negative regulation of cell proliferation  protein localization to kinetochore  mitotic spindle checkpoint  
Ontology : EGO-EBIkinetochore  chromatin  cell cycle arrest  traversing start control point of mitotic cell cycle  negative regulation of cell proliferation  protein localization to kinetochore  mitotic spindle checkpoint  
Protein Interaction DatabaseMTBP
Wikipedia pathwaysMTBP
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MTBP
SNP (GeneSNP Utah)MTBP
SNP : HGBaseMTBP
Genetic variants : HAPMAPMTBP
1000_GenomesMTBP 
ICGC programENSG00000172167 
CONAN: Copy Number AnalysisMTBP 
Somatic Mutations in Cancer : COSMICMTBP 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
DECIPHER (Syndromes)8:121457638-121535875
Mutations and Diseases : HGMDMTBP
OMIM605927   
MedgenMTBP
GENETestsMTBP
Disease Genetic AssociationMTBP
Huge Navigator MTBP [HugePedia]  MTBP [HugeCancerGEM]
Genomic VariantsMTBP  MTBP [DGVbeta]
Exome VariantMTBP
dbVarMTBP
ClinVarMTBP
snp3D : Map Gene to Disease27085
General knowledge
Homologs : HomoloGeneMTBP
Homology/Alignments : Family Browser (UCSC)MTBP
Phylogenetic Trees/Animal Genes : TreeFamMTBP
Chemical/Protein Interactions : CTD27085
Chemical/Pharm GKB GenePA31224
Clinical trialMTBP
Cancer Resource (Charite)ENSG00000172167
Other databases
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
CoreMineMTBP
GoPubMedMTBP
iHOPMTBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Nov 8 17:43:22 CET 2014

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