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MTFP1 (mitochondrial fission process 1)

Identity

Alias_symbol (synonym)MTP18
HSPC242
Other alias
HGNC (Hugo) MTFP1
LocusID (NCBI) 51537
Atlas_Id 70541
Location 22q12.2  [Link to chromosome band 22q12]
Location_base_pair Starts at 30425623 and ends at 30429054 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MTFP1   26945
Cards
Entrez_Gene (NCBI)MTFP1  51537  mitochondrial fission process 1
AliasesHSPC242; MTP18
GeneCards (Weizmann)MTFP1
Ensembl hg19 (Hinxton)ENSG00000242114 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242114 [Gene_View]  chr22:30425623-30429054 [Contig_View]  MTFP1 [Vega]
ICGC DataPortalENSG00000242114
TCGA cBioPortalMTFP1
AceView (NCBI)MTFP1
Genatlas (Paris)MTFP1
WikiGenes51537
SOURCE (Princeton)MTFP1
Genetics Home Reference (NIH)MTFP1
Genomic and cartography
GoldenPath hg38 (UCSC)MTFP1  -     chr22:30425623-30429054 +  22q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MTFP1  -     22q12.2   [Description]    (hg19-Feb_2009)
EnsemblMTFP1 - 22q12.2 [CytoView hg19]  MTFP1 - 22q12.2 [CytoView hg38]
Mapping of homologs : NCBIMTFP1 [Mapview hg19]  MTFP1 [Mapview hg38]
OMIM610235   
Gene and transcription
Genbank (Entrez)AF060924 AF151076 AK026104 BC001608 BC009300
RefSeq transcript (Entrez)NM_001003704 NM_016498
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MTFP1
Cluster EST : UnigeneHs.713636 [ NCBI ]
CGAP (NCI)Hs.713636
Alternative Splicing GalleryENSG00000242114
Gene ExpressionMTFP1 [ NCBI-GEO ]   MTFP1 [ EBI - ARRAY_EXPRESS ]   MTFP1 [ SEEK ]   MTFP1 [ MEM ]
Gene Expression Viewer (FireBrowse)MTFP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51537
GTEX Portal (Tissue expression)MTFP1
Human Protein AtlasENSG00000242114-MTFP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UDX5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UDX5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UDX5
Splice isoforms : SwissVarQ9UDX5
PhosPhoSitePlusQ9UDX5
Domains : Interpro (EBI)Mitochondrial_18_kDa_protein_   
Domain families : Pfam (Sanger)MTP18 (PF10558)   
Domain families : Pfam (NCBI)pfam10558   
Conserved Domain (NCBI)MTFP1
DMDM Disease mutations51537
Blocks (Seattle)MTFP1
SuperfamilyQ9UDX5
Human Protein Atlas [tissue]ENSG00000242114-MTFP1 [tissue]
Peptide AtlasQ9UDX5
HPRD17612
IPIIPI00784376   IPI00456009   IPI00879643   IPI00879813   
Protein Interaction databases
DIP (DOE-UCLA)Q9UDX5
IntAct (EBI)Q9UDX5
FunCoupENSG00000242114
BioGRIDMTFP1
STRING (EMBL)MTFP1
ZODIACMTFP1
Ontologies - Pathways
QuickGOQ9UDX5
Ontology : AmiGOmitochondrial fission  mitochondrial inner membrane  apoptotic process  integral component of membrane  
Ontology : EGO-EBImitochondrial fission  mitochondrial inner membrane  apoptotic process  integral component of membrane  
NDEx NetworkMTFP1
Atlas of Cancer Signalling NetworkMTFP1
Wikipedia pathwaysMTFP1
Orthology - Evolution
OrthoDB51537
GeneTree (enSembl)ENSG00000242114
Phylogenetic Trees/Animal Genes : TreeFamMTFP1
HOVERGENQ9UDX5
HOGENOMQ9UDX5
Homologs : HomoloGeneMTFP1
Homology/Alignments : Family Browser (UCSC)MTFP1
Gene fusions - Rearrangements
Tumor Fusion PortalMTFP1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMTFP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MTFP1
dbVarMTFP1
ClinVarMTFP1
1000_GenomesMTFP1 
Exome Variant ServerMTFP1
ExAC (Exome Aggregation Consortium)ENSG00000242114
GNOMAD BrowserENSG00000242114
Genetic variants : HAPMAP51537
Genomic Variants (DGV)MTFP1 [DGVbeta]
DECIPHERMTFP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMTFP1 
Mutations
ICGC Data PortalMTFP1 
TCGA Data PortalMTFP1 
Broad Tumor PortalMTFP1
OASIS PortalMTFP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMTFP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMTFP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MTFP1
DgiDB (Drug Gene Interaction Database)MTFP1
DoCM (Curated mutations)MTFP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MTFP1 (select a term)
intoGenMTFP1
Cancer3DMTFP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610235   
Orphanet
DisGeNETMTFP1
MedgenMTFP1
Genetic Testing Registry MTFP1
NextProtQ9UDX5 [Medical]
TSGene51537
GENETestsMTFP1
Target ValidationMTFP1
Huge Navigator MTFP1 [HugePedia]
snp3D : Map Gene to Disease51537
BioCentury BCIQMTFP1
ClinGenMTFP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51537
Chemical/Pharm GKB GenePA166048974
Clinical trialMTFP1
Miscellaneous
canSAR (ICR)MTFP1 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMTFP1
EVEXMTFP1
GoPubMedMTFP1
iHOPMTFP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:44:05 CET 2017

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