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MTFR1L (mitochondrial fission regulator 1 like)

Identity

Alias_namesFAM54B
family with sequence similarity 54, member B
mitochondrial fission regulator 1-like
Other aliasHYST1888
MST116
MSTP116
HGNC (Hugo) MTFR1L
LocusID (NCBI) 56181
Atlas_Id 70543
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 25819906 and ends at 25832942 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MTFR1L (1p36.11) / BROX (1q41)MTFR1L (1p36.11) / MTFR1L (1p36.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MTFR1L   28836
Cards
Entrez_Gene (NCBI)MTFR1L  56181  mitochondrial fission regulator 1 like
AliasesFAM54B; HYST1888; MST116; MSTP116
GeneCards (Weizmann)MTFR1L
Ensembl hg19 (Hinxton)ENSG00000117640 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000117640 [Gene_View]  chr1:25819906-25832942 [Contig_View]  MTFR1L [Vega]
ICGC DataPortalENSG00000117640
TCGA cBioPortalMTFR1L
AceView (NCBI)MTFR1L
Genatlas (Paris)MTFR1L
WikiGenes56181
SOURCE (Princeton)MTFR1L
Genetics Home Reference (NIH)MTFR1L
Genomic and cartography
GoldenPath hg38 (UCSC)MTFR1L  -     chr1:25819906-25832942 +  1p36.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MTFR1L  -     1p36.11   [Description]    (hg19-Feb_2009)
EnsemblMTFR1L - 1p36.11 [CytoView hg19]  MTFR1L - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBIMTFR1L [Mapview hg19]  MTFR1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB075880 AF173891 AK056721 AK127164 AK290744
RefSeq transcript (Entrez)NM_001099625 NM_001099626 NM_001099627 NM_019557
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MTFR1L
Cluster EST : UnigeneHs.149305 [ NCBI ]
CGAP (NCI)Hs.149305
Alternative Splicing GalleryENSG00000117640
Gene ExpressionMTFR1L [ NCBI-GEO ]   MTFR1L [ EBI - ARRAY_EXPRESS ]   MTFR1L [ SEEK ]   MTFR1L [ MEM ]
Gene Expression Viewer (FireBrowse)MTFR1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56181
GTEX Portal (Tissue expression)MTFR1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H019   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H019  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H019
Splice isoforms : SwissVarQ9H019
PhosPhoSitePlusQ9H019
Domains : Interpro (EBI)Mtfr1   
Domain families : Pfam (Sanger)Mito_fiss_reg (PF05308)   
Domain families : Pfam (NCBI)pfam05308   
Conserved Domain (NCBI)MTFR1L
DMDM Disease mutations56181
Blocks (Seattle)MTFR1L
SuperfamilyQ9H019
Human Protein AtlasENSG00000117640
Peptide AtlasQ9H019
HPRD14248
IPIIPI00470480   IPI00645882   IPI00071826   IPI01013869   IPI00983754   IPI00980195   IPI00978829   IPI00980798   IPI00981785   IPI00983674   IPI00975799   IPI00981915   IPI00981225   IPI00975933   
Protein Interaction databases
DIP (DOE-UCLA)Q9H019
IntAct (EBI)Q9H019
FunCoupENSG00000117640
BioGRIDMTFR1L
STRING (EMBL)MTFR1L
ZODIACMTFR1L
Ontologies - Pathways
QuickGOQ9H019
Ontology : AmiGOmitochondrial fission  protein binding  mitochondrion  aerobic respiration  
Ontology : EGO-EBImitochondrial fission  protein binding  mitochondrion  aerobic respiration  
NDEx NetworkMTFR1L
Atlas of Cancer Signalling NetworkMTFR1L
Wikipedia pathwaysMTFR1L
Orthology - Evolution
OrthoDB56181
GeneTree (enSembl)ENSG00000117640
Phylogenetic Trees/Animal Genes : TreeFamMTFR1L
HOVERGENQ9H019
HOGENOMQ9H019
Homologs : HomoloGeneMTFR1L
Homology/Alignments : Family Browser (UCSC)MTFR1L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMTFR1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MTFR1L
dbVarMTFR1L
ClinVarMTFR1L
1000_GenomesMTFR1L 
Exome Variant ServerMTFR1L
ExAC (Exome Aggregation Consortium)MTFR1L (select the gene name)
Genetic variants : HAPMAP56181
Genomic Variants (DGV)MTFR1L [DGVbeta]
DECIPHERMTFR1L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMTFR1L 
Mutations
ICGC Data PortalMTFR1L 
TCGA Data PortalMTFR1L 
Broad Tumor PortalMTFR1L
OASIS PortalMTFR1L [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMTFR1L
BioMutasearch MTFR1L
DgiDB (Drug Gene Interaction Database)MTFR1L
DoCM (Curated mutations)MTFR1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MTFR1L (select a term)
intoGenMTFR1L
Cancer3DMTFR1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMTFR1L
Genetic Testing Registry MTFR1L
NextProtQ9H019 [Medical]
TSGene56181
GENETestsMTFR1L
Target ValidationMTFR1L
Huge Navigator MTFR1L [HugePedia]
snp3D : Map Gene to Disease56181
BioCentury BCIQMTFR1L
ClinGenMTFR1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56181
Chemical/Pharm GKB GenePA142671888
Clinical trialMTFR1L
Miscellaneous
canSAR (ICR)MTFR1L (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMTFR1L
EVEXMTFR1L
GoPubMedMTFR1L
iHOPMTFR1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:31:25 CEST 2017

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