Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MTHFD2P1 (methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1)

Identity

Other alias-
HGNC (Hugo) MTHFD2P1
LocusID (NCBI) 100287639
Atlas_Id 70549
Location 3q11.2  [Link to chromosome band 3q11]
Location_base_pair Starts at 95373267 and ends at 95402037 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MTHFD2P1   48859
Cards
Entrez_Gene (NCBI)MTHFD2P1  100287639  methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 1
Aliases
GeneCards (Weizmann)MTHFD2P1
Ensembl hg19 (Hinxton)ENSG00000244681 [Gene_View]  chr3:95373267-95402037 [Contig_View]  MTHFD2P1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000244681 [Gene_View]  chr3:95373267-95402037 [Contig_View]  MTHFD2P1 [Vega]
ICGC DataPortalENSG00000244681
TCGA cBioPortalMTHFD2P1
AceView (NCBI)MTHFD2P1
Genatlas (Paris)MTHFD2P1
WikiGenes100287639
SOURCE (Princeton)MTHFD2P1
Genetics Home Reference (NIH)MTHFD2P1
Genomic and cartography
GoldenPath hg19 (UCSC)MTHFD2P1  -     chr3:95373267-95402037 -  3q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MTHFD2P1  -     3q11.2   [Description]    (hg38-Dec_2013)
EnsemblMTHFD2P1 - 3q11.2 [CytoView hg19]  MTHFD2P1 - 3q11.2 [CytoView hg38]
Mapping of homologs : NCBIMTHFD2P1 [Mapview hg19]  MTHFD2P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092228 BJ991572 BJ991573 DA705646 DB323975
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NG_005661 NG_022212 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)MTHFD2P1
Cluster EST : UnigeneHs.591320 [ NCBI ]
CGAP (NCI)Hs.591320
Alternative Splicing GalleryENSG00000244681
Gene ExpressionMTHFD2P1 [ NCBI-GEO ]   MTHFD2P1 [ EBI - ARRAY_EXPRESS ]   MTHFD2P1 [ SEEK ]   MTHFD2P1 [ MEM ]
Gene Expression Viewer (FireBrowse)MTHFD2P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287639
GTEX Portal (Tissue expression)MTHFD2P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MTHFD2P1
DMDM Disease mutations100287639
Blocks (Seattle)MTHFD2P1
Human Protein AtlasENSG00000244681
Protein Interaction databases
FunCoupENSG00000244681
BioGRIDMTHFD2P1
STRING (EMBL)MTHFD2P1
ZODIACMTHFD2P1
Ontologies - Pathways
Huge Navigator MTHFD2P1 [HugePedia]
snp3D : Map Gene to Disease100287639
BioCentury BCIQMTHFD2P1
ClinGenMTHFD2P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287639
Clinical trialMTHFD2P1
Miscellaneous
canSAR (ICR)MTHFD2P1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMTHFD2P1
EVEXMTHFD2P1
GoPubMedMTHFD2P1
iHOPMTHFD2P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:34:04 CET 2017

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