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MTMR7 (myotubularin related protein 7)

Identity

Alias (NCBI)-
HGNC (Hugo) MTMR7
LocusID (NCBI) 9108
Atlas_Id 57319
Location 8p22  [Link to chromosome band 8p22]
Location_base_pair Starts at 17296794 and ends at 17413351 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CUX1 (7q22.1) / MTMR7 (8p22)SRBD1 (2p21) / MTMR7 (8p22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)MTMR7   7454
Cards
Entrez_Gene (NCBI)MTMR7    myotubularin related protein 7
Aliases
GeneCards (Weizmann)MTMR7
Ensembl hg19 (Hinxton)ENSG00000003987 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000003987 [Gene_View]  ENSG00000003987 [Sequence]  chr8:17296794-17413351 [Contig_View]  MTMR7 [Vega]
ICGC DataPortalENSG00000003987
TCGA cBioPortalMTMR7
AceView (NCBI)MTMR7
Genatlas (Paris)MTMR7
SOURCE (Princeton)MTMR7
Genetics Home Reference (NIH)MTMR7
Genomic and cartography
GoldenPath hg38 (UCSC)MTMR7  -     chr8:17296794-17413351 -  8p22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MTMR7  -     8p22   [Description]    (hg19-Feb_2009)
GoldenPathMTMR7 - 8p22 [CytoView hg19]  MTMR7 - 8p22 [CytoView hg38]
ImmunoBaseENSG00000003987
Genome Data Viewer NCBIMTMR7 [Mapview hg19]  
OMIM603562   
Gene and transcription
Genbank (Entrez)AF073482 AK123201 AK294468 AK303762 AK303803
RefSeq transcript (Entrez)NM_004686
Consensus coding sequences : CCDS (NCBI)MTMR7
Gene ExpressionMTMR7 [ NCBI-GEO ]   MTMR7 [ EBI - ARRAY_EXPRESS ]   MTMR7 [ SEEK ]   MTMR7 [ MEM ]
Gene Expression Viewer (FireBrowse)MTMR7 [ Firebrowse - Broad ]
GenevisibleExpression of MTMR7 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9108
GTEX Portal (Tissue expression)MTMR7
Human Protein AtlasENSG00000003987-MTMR7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y216   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y216  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y216
PhosPhoSitePlusQ9Y216
Domaine pattern : Prosite (Expaxy)PPASE_MYOTUBULARIN (PS51339)    TYR_PHOSPHATASE_1 (PS00383)    TYR_PHOSPHATASE_2 (PS50056)   
Domains : Interpro (EBI)MTMR7    MTMR7_PH-GRAM    Myotubularin-like_Pase_dom    Myotubularin_fam    PH-like_dom_sf    Prot-tyrosine_phosphatase-like    Tyr_Pase_AS    Tyr_Pase_cat    TYR_PHOSPHATASE_dom   
Domain families : Pfam (Sanger)Myotub-related (PF06602)   
Domain families : Pfam (NCBI)pfam06602   
Domain families : Smart (EMBL)PTPc_motif (SM00404)  
Conserved Domain (NCBI)MTMR7
SuperfamilyQ9Y216
AlphaFold pdb e-kbQ9Y216   
Human Protein Atlas [tissue]ENSG00000003987-MTMR7 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9Y216
IntAct (EBI)Q9Y216
BioGRIDMTMR7
STRING (EMBL)MTMR7
ZODIACMTMR7
Ontologies - Pathways
QuickGOQ9Y216
Ontology : AmiGOphosphatidylinositol-3-phosphatase activity  protein tyrosine phosphatase activity  protein binding  cytoplasm  cytoplasm  cytosol  protein dephosphorylation  phosphatidylinositol biosynthetic process  endomembrane system  membrane  membrane  inositol bisphosphate phosphatase activity  peptidyl-tyrosine dephosphorylation  inositol phosphate dephosphorylation  phosphatidylinositol dephosphorylation  
Ontology : EGO-EBIphosphatidylinositol-3-phosphatase activity  protein tyrosine phosphatase activity  protein binding  cytoplasm  cytoplasm  cytosol  protein dephosphorylation  phosphatidylinositol biosynthetic process  endomembrane system  membrane  membrane  inositol bisphosphate phosphatase activity  peptidyl-tyrosine dephosphorylation  inositol phosphate dephosphorylation  phosphatidylinositol dephosphorylation  
Pathways : KEGGFructose and mannose metabolism   
NDEx NetworkMTMR7
Atlas of Cancer Signalling NetworkMTMR7
Wikipedia pathwaysMTMR7
Orthology - Evolution
OrthoDB9108
GeneTree (enSembl)ENSG00000003987
Phylogenetic Trees/Animal Genes : TreeFamMTMR7
Homologs : HomoloGeneMTMR7
Homology/Alignments : Family Browser (UCSC)MTMR7
Gene fusions - Rearrangements
Fusion : QuiverMTMR7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMTMR7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MTMR7
dbVarMTMR7
ClinVarMTMR7
MonarchMTMR7
1000_GenomesMTMR7 
Exome Variant ServerMTMR7
GNOMAD BrowserENSG00000003987
Varsome BrowserMTMR7
ACMGMTMR7 variants
VarityQ9Y216
Genomic Variants (DGV)MTMR7 [DGVbeta]
DECIPHERMTMR7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMTMR7 
Mutations
ICGC Data PortalMTMR7 
TCGA Data PortalMTMR7 
Broad Tumor PortalMTMR7
OASIS PortalMTMR7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMTMR7  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMTMR7
Mutations and Diseases : HGMDMTMR7
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMTMR7
DgiDB (Drug Gene Interaction Database)MTMR7
DoCM (Curated mutations)MTMR7
CIViC (Clinical Interpretations of Variants in Cancer)MTMR7
Cancer3DMTMR7
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603562   
Orphanet
DisGeNETMTMR7
MedgenMTMR7
Genetic Testing Registry MTMR7
NextProtQ9Y216 [Medical]
GENETestsMTMR7
Target ValidationMTMR7
Huge Navigator MTMR7 [HugePedia]
ClinGenMTMR7
Clinical trials, drugs, therapy
MyCancerGenomeMTMR7
Protein Interactions : CTDMTMR7
Pharm GKB GenePA31257
PharosQ9Y216
Clinical trialMTMR7
Miscellaneous
canSAR (ICR)MTMR7
HarmonizomeMTMR7
DataMed IndexMTMR7
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMTMR7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:21:33 CEST 2021

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