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MTRNR2L6 (MT-RNR2-like 6)

Identity

Other aliasHN6
HGNC (Hugo) MTRNR2L6
LocusID (NCBI) 100463482
Atlas_Id 70572
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 142666299 and ends at 142667693 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MTRNR2L6   37163
Cards
Entrez_Gene (NCBI)MTRNR2L6  100463482  MT-RNR2-like 6
AliasesHN6
GeneCards (Weizmann)MTRNR2L6
Ensembl hg19 (Hinxton)ENSG00000270672 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000270672 [Gene_View]  chr7:142666299-142667693 [Contig_View]  MTRNR2L6 [Vega]
ICGC DataPortalENSG00000270672
TCGA cBioPortalMTRNR2L6
AceView (NCBI)MTRNR2L6
Genatlas (Paris)MTRNR2L6
WikiGenes100463482
SOURCE (Princeton)MTRNR2L6
Genetics Home Reference (NIH)MTRNR2L6
Genomic and cartography
GoldenPath hg38 (UCSC)MTRNR2L6  -     chr7:142666299-142667693 +  7q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MTRNR2L6  -     7q34   [Description]    (hg19-Feb_2009)
EnsemblMTRNR2L6 - 7q34 [CytoView hg19]  MTRNR2L6 - 7q34 [CytoView hg38]
Mapping of homologs : NCBIMTRNR2L6 [Mapview hg19]  MTRNR2L6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001190487
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_187562
Consensus coding sequences : CCDS (NCBI)MTRNR2L6
Alternative Splicing GalleryENSG00000270672
Gene ExpressionMTRNR2L6 [ NCBI-GEO ]   MTRNR2L6 [ EBI - ARRAY_EXPRESS ]   MTRNR2L6 [ SEEK ]   MTRNR2L6 [ MEM ]
Gene Expression Viewer (FireBrowse)MTRNR2L6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100463482
GTEX Portal (Tissue expression)MTRNR2L6
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CJ73   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CJ73  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CJ73
Splice isoforms : SwissVarP0CJ73
PhosPhoSitePlusP0CJ73
Domains : Interpro (EBI)Humanin   
Domain families : Pfam (Sanger)Humanin (PF15040)   
Domain families : Pfam (NCBI)pfam15040   
Conserved Domain (NCBI)MTRNR2L6
DMDM Disease mutations100463482
Blocks (Seattle)MTRNR2L6
SuperfamilyP0CJ73
Human Protein AtlasENSG00000270672
Peptide AtlasP0CJ73
IPIIPI00973951   
Protein Interaction databases
DIP (DOE-UCLA)P0CJ73
IntAct (EBI)P0CJ73
FunCoupENSG00000270672
BioGRIDMTRNR2L6
STRING (EMBL)MTRNR2L6
ZODIACMTRNR2L6
Ontologies - Pathways
QuickGOP0CJ73
Ontology : AmiGOextracellular region  cytoplasm  
Ontology : EGO-EBIextracellular region  cytoplasm  
NDEx NetworkMTRNR2L6
Atlas of Cancer Signalling NetworkMTRNR2L6
Wikipedia pathwaysMTRNR2L6
Orthology - Evolution
OrthoDB100463482
GeneTree (enSembl)ENSG00000270672
Phylogenetic Trees/Animal Genes : TreeFamMTRNR2L6
HOVERGENP0CJ73
HOGENOMP0CJ73
Homologs : HomoloGeneMTRNR2L6
Homology/Alignments : Family Browser (UCSC)MTRNR2L6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMTRNR2L6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MTRNR2L6
dbVarMTRNR2L6
ClinVarMTRNR2L6
1000_GenomesMTRNR2L6 
Exome Variant ServerMTRNR2L6
ExAC (Exome Aggregation Consortium)MTRNR2L6 (select the gene name)
Genetic variants : HAPMAP100463482
Genomic Variants (DGV)MTRNR2L6 [DGVbeta]
DECIPHERMTRNR2L6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMTRNR2L6 
Mutations
ICGC Data PortalMTRNR2L6 
TCGA Data PortalMTRNR2L6 
Broad Tumor PortalMTRNR2L6
OASIS PortalMTRNR2L6 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMTRNR2L6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MTRNR2L6
DgiDB (Drug Gene Interaction Database)MTRNR2L6
DoCM (Curated mutations)MTRNR2L6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MTRNR2L6 (select a term)
intoGenMTRNR2L6
Cancer3DMTRNR2L6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMTRNR2L6
Genetic Testing Registry MTRNR2L6
NextProtP0CJ73 [Medical]
TSGene100463482
GENETestsMTRNR2L6
Target ValidationMTRNR2L6
Huge Navigator MTRNR2L6 [HugePedia]
snp3D : Map Gene to Disease100463482
BioCentury BCIQMTRNR2L6
ClinGenMTRNR2L6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100463482
Chemical/Pharm GKB GenePA165618164
Clinical trialMTRNR2L6
Miscellaneous
canSAR (ICR)MTRNR2L6 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMTRNR2L6
EVEXMTRNR2L6
GoPubMedMTRNR2L6
iHOPMTRNR2L6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:31:55 CEST 2017

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