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MTRNR2L7 (MT-RNR2-like 7)

Identity

Other aliasHN7
HGNC (Hugo) MTRNR2L7
LocusID (NCBI) 100288485
Atlas_Id 70573
Location 10p11.21  [Link to chromosome band 10p11]
Location_base_pair Starts at 37601438 and ends at 37602931 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MTRNR2L7   37164
Cards
Entrez_Gene (NCBI)MTRNR2L7  100288485  MT-RNR2-like 7
AliasesHN7
GeneCards (Weizmann)MTRNR2L7
Ensembl hg19 (Hinxton)ENSG00000256892 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000256892 [Gene_View]  chr10:37601438-37602931 [Contig_View]  MTRNR2L7 [Vega]
ICGC DataPortalENSG00000256892
TCGA cBioPortalMTRNR2L7
AceView (NCBI)MTRNR2L7
Genatlas (Paris)MTRNR2L7
WikiGenes100288485
SOURCE (Princeton)MTRNR2L7
Genetics Home Reference (NIH)MTRNR2L7
Genomic and cartography
GoldenPath hg38 (UCSC)MTRNR2L7  -     chr10:37601438-37602931 -  10p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MTRNR2L7  -     10p11.21   [Description]    (hg19-Feb_2009)
EnsemblMTRNR2L7 - 10p11.21 [CytoView hg19]  MTRNR2L7 - 10p11.21 [CytoView hg38]
Mapping of homologs : NCBIMTRNR2L7 [Mapview hg19]  MTRNR2L7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001190489
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MTRNR2L7
Cluster EST : UnigeneHs.727092 [ NCBI ]
CGAP (NCI)Hs.727092
Alternative Splicing GalleryENSG00000256892
Gene ExpressionMTRNR2L7 [ NCBI-GEO ]   MTRNR2L7 [ EBI - ARRAY_EXPRESS ]   MTRNR2L7 [ SEEK ]   MTRNR2L7 [ MEM ]
Gene Expression Viewer (FireBrowse)MTRNR2L7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100288485
GTEX Portal (Tissue expression)MTRNR2L7
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CJ74   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CJ74  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CJ74
Splice isoforms : SwissVarP0CJ74
PhosPhoSitePlusP0CJ74
Domains : Interpro (EBI)Humanin   
Domain families : Pfam (Sanger)Humanin (PF15040)   
Domain families : Pfam (NCBI)pfam15040   
Conserved Domain (NCBI)MTRNR2L7
DMDM Disease mutations100288485
Blocks (Seattle)MTRNR2L7
SuperfamilyP0CJ74
Human Protein AtlasENSG00000256892
Peptide AtlasP0CJ74
IPIIPI00974029   
Protein Interaction databases
DIP (DOE-UCLA)P0CJ74
IntAct (EBI)P0CJ74
FunCoupENSG00000256892
BioGRIDMTRNR2L7
STRING (EMBL)MTRNR2L7
ZODIACMTRNR2L7
Ontologies - Pathways
QuickGOP0CJ74
Ontology : AmiGOextracellular region  cytoplasm  
Ontology : EGO-EBIextracellular region  cytoplasm  
NDEx NetworkMTRNR2L7
Atlas of Cancer Signalling NetworkMTRNR2L7
Wikipedia pathwaysMTRNR2L7
Orthology - Evolution
OrthoDB100288485
GeneTree (enSembl)ENSG00000256892
Phylogenetic Trees/Animal Genes : TreeFamMTRNR2L7
HOVERGENP0CJ74
HOGENOMP0CJ74
Homologs : HomoloGeneMTRNR2L7
Homology/Alignments : Family Browser (UCSC)MTRNR2L7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMTRNR2L7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MTRNR2L7
dbVarMTRNR2L7
ClinVarMTRNR2L7
1000_GenomesMTRNR2L7 
Exome Variant ServerMTRNR2L7
ExAC (Exome Aggregation Consortium)MTRNR2L7 (select the gene name)
Genetic variants : HAPMAP100288485
Genomic Variants (DGV)MTRNR2L7 [DGVbeta]
DECIPHERMTRNR2L7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMTRNR2L7 
Mutations
ICGC Data PortalMTRNR2L7 
TCGA Data PortalMTRNR2L7 
Broad Tumor PortalMTRNR2L7
OASIS PortalMTRNR2L7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMTRNR2L7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMTRNR2L7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MTRNR2L7
DgiDB (Drug Gene Interaction Database)MTRNR2L7
DoCM (Curated mutations)MTRNR2L7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MTRNR2L7 (select a term)
intoGenMTRNR2L7
Cancer3DMTRNR2L7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMTRNR2L7
Genetic Testing Registry MTRNR2L7
NextProtP0CJ74 [Medical]
TSGene100288485
GENETestsMTRNR2L7
Target ValidationMTRNR2L7
Huge Navigator MTRNR2L7 [HugePedia]
snp3D : Map Gene to Disease100288485
BioCentury BCIQMTRNR2L7
ClinGenMTRNR2L7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100288485
Chemical/Pharm GKB GenePA165548890
Clinical trialMTRNR2L7
Miscellaneous
canSAR (ICR)MTRNR2L7 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMTRNR2L7
EVEXMTRNR2L7
GoPubMedMTRNR2L7
iHOPMTRNR2L7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:31:55 CEST 2017

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