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MTRNR2L8 (MT-RNR2-like 8)

Identity

Other aliasHN8
HGNC (Hugo) MTRNR2L8
LocusID (NCBI) 100463486
Atlas_Id 70574
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 10507887 and ends at 10509176 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MTATP6P1 () / MTRNR2L8 (11p15.4)MTRNR2L8 (11p15.4) / AKAP8 (19p13.12)MTRNR2L8 (11p15.4) / PHACTR2 (6q24.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MTRNR2L8   37165
Cards
Entrez_Gene (NCBI)MTRNR2L8  100463486  MT-RNR2-like 8
AliasesHN8
GeneCards (Weizmann)MTRNR2L8
Ensembl hg19 (Hinxton)ENSG00000255823 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255823 [Gene_View]  chr11:10507887-10509176 [Contig_View]  MTRNR2L8 [Vega]
ICGC DataPortalENSG00000255823
TCGA cBioPortalMTRNR2L8
AceView (NCBI)MTRNR2L8
Genatlas (Paris)MTRNR2L8
WikiGenes100463486
SOURCE (Princeton)MTRNR2L8
Genetics Home Reference (NIH)MTRNR2L8
Genomic and cartography
GoldenPath hg38 (UCSC)MTRNR2L8  -     chr11:10507887-10509176 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MTRNR2L8  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblMTRNR2L8 - 11p15.4 [CytoView hg19]  MTRNR2L8 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIMTRNR2L8 [Mapview hg19]  MTRNR2L8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001190702
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MTRNR2L8
Cluster EST : UnigeneHs.717003 [ NCBI ]
CGAP (NCI)Hs.717003
Alternative Splicing GalleryENSG00000255823
Gene ExpressionMTRNR2L8 [ NCBI-GEO ]   MTRNR2L8 [ EBI - ARRAY_EXPRESS ]   MTRNR2L8 [ SEEK ]   MTRNR2L8 [ MEM ]
Gene Expression Viewer (FireBrowse)MTRNR2L8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100463486
GTEX Portal (Tissue expression)MTRNR2L8
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CJ75   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CJ75  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CJ75
Splice isoforms : SwissVarP0CJ75
PhosPhoSitePlusP0CJ75
Domains : Interpro (EBI)Humanin   
Domain families : Pfam (Sanger)Humanin (PF15040)   
Domain families : Pfam (NCBI)pfam15040   
Conserved Domain (NCBI)MTRNR2L8
DMDM Disease mutations100463486
Blocks (Seattle)MTRNR2L8
SuperfamilyP0CJ75
Human Protein AtlasENSG00000255823
Peptide AtlasP0CJ75
IPIIPI00974172   
Protein Interaction databases
DIP (DOE-UCLA)P0CJ75
IntAct (EBI)P0CJ75
FunCoupENSG00000255823
BioGRIDMTRNR2L8
STRING (EMBL)MTRNR2L8
ZODIACMTRNR2L8
Ontologies - Pathways
QuickGOP0CJ75
Ontology : AmiGOextracellular region  cytoplasm  
Ontology : EGO-EBIextracellular region  cytoplasm  
NDEx NetworkMTRNR2L8
Atlas of Cancer Signalling NetworkMTRNR2L8
Wikipedia pathwaysMTRNR2L8
Orthology - Evolution
OrthoDB100463486
GeneTree (enSembl)ENSG00000255823
Phylogenetic Trees/Animal Genes : TreeFamMTRNR2L8
HOVERGENP0CJ75
HOGENOMP0CJ75
Homologs : HomoloGeneMTRNR2L8
Homology/Alignments : Family Browser (UCSC)MTRNR2L8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMTRNR2L8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MTRNR2L8
dbVarMTRNR2L8
ClinVarMTRNR2L8
1000_GenomesMTRNR2L8 
Exome Variant ServerMTRNR2L8
ExAC (Exome Aggregation Consortium)MTRNR2L8 (select the gene name)
Genetic variants : HAPMAP100463486
Genomic Variants (DGV)MTRNR2L8 [DGVbeta]
DECIPHERMTRNR2L8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMTRNR2L8 
Mutations
ICGC Data PortalMTRNR2L8 
TCGA Data PortalMTRNR2L8 
Broad Tumor PortalMTRNR2L8
OASIS PortalMTRNR2L8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMTRNR2L8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMTRNR2L8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MTRNR2L8
DgiDB (Drug Gene Interaction Database)MTRNR2L8
DoCM (Curated mutations)MTRNR2L8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MTRNR2L8 (select a term)
intoGenMTRNR2L8
Cancer3DMTRNR2L8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMTRNR2L8
Genetic Testing Registry MTRNR2L8
NextProtP0CJ75 [Medical]
TSGene100463486
GENETestsMTRNR2L8
Target ValidationMTRNR2L8
Huge Navigator MTRNR2L8 [HugePedia]
snp3D : Map Gene to Disease100463486
BioCentury BCIQMTRNR2L8
ClinGenMTRNR2L8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100463486
Chemical/Pharm GKB GenePA165543496
Clinical trialMTRNR2L8
Miscellaneous
canSAR (ICR)MTRNR2L8 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMTRNR2L8
EVEXMTRNR2L8
GoPubMedMTRNR2L8
iHOPMTRNR2L8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed May 31 15:31:55 CEST 2017

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