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MTSS1L (MTSS1L, I-BAR domain containing)

Identity

Alias_namesmetastasis suppressor 1 like
Alias_symbol (synonym)ABBA-1
LOC92154
ABBA
Other aliasABBA1
HGNC (Hugo) MTSS1L
LocusID (NCBI) 92154
Atlas_Id 50535
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 70661204 and ends at 70686051 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FBXO44 (1p36.22) / MTSS1L (16q22.1)LRTOMT (11q13.4) / MTSS1L (16q22.1)MTSS1L (16q22.1) / CSF1R (5q32)
MTSS1L (16q22.1) / SAMD9L (7q21.2)MTSS1L (16q22.1) / VAC14 (16q22.1)PPIH (1p34.2) / MTSS1L (16q22.1)
MTSS1L 16q22.1 / VAC14 16q22.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MTSS1L   25094
Cards
Entrez_Gene (NCBI)MTSS1L  92154  MTSS1L, I-BAR domain containing
AliasesABBA; ABBA-1; ABBA1
GeneCards (Weizmann)MTSS1L
Ensembl hg19 (Hinxton)ENSG00000132613 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132613 [Gene_View]  chr16:70661204-70686051 [Contig_View]  MTSS1L [Vega]
ICGC DataPortalENSG00000132613
TCGA cBioPortalMTSS1L
AceView (NCBI)MTSS1L
Genatlas (Paris)MTSS1L
WikiGenes92154
SOURCE (Princeton)MTSS1L
Genetics Home Reference (NIH)MTSS1L
Genomic and cartography
GoldenPath hg38 (UCSC)MTSS1L  -     chr16:70661204-70686051 -  16q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MTSS1L  -     16q22.1   [Description]    (hg19-Feb_2009)
EnsemblMTSS1L - 16q22.1 [CytoView hg19]  MTSS1L - 16q22.1 [CytoView hg38]
Mapping of homologs : NCBIMTSS1L [Mapview hg19]  MTSS1L [Mapview hg38]
OMIM616951   
Gene and transcription
Genbank (Entrez)AB115770 BC002770 BC011452 BC024752 BC025271
RefSeq transcript (Entrez)NM_138383
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MTSS1L
Cluster EST : UnigeneHs.432387 [ NCBI ]
CGAP (NCI)Hs.432387
Alternative Splicing GalleryENSG00000132613
Gene ExpressionMTSS1L [ NCBI-GEO ]   MTSS1L [ EBI - ARRAY_EXPRESS ]   MTSS1L [ SEEK ]   MTSS1L [ MEM ]
Gene Expression Viewer (FireBrowse)MTSS1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)92154
GTEX Portal (Tissue expression)MTSS1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ765P7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ765P7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ765P7
Splice isoforms : SwissVarQ765P7
PhosPhoSitePlusQ765P7
Domaine pattern : Prosite (Expaxy)IMD (PS51338)   
Domains : Interpro (EBI)ABBA    I-BAR_dom    MIM/ABBA   
Domain families : Pfam (Sanger)IMD (PF08397)   
Domain families : Pfam (NCBI)pfam08397   
Conserved Domain (NCBI)MTSS1L
DMDM Disease mutations92154
Blocks (Seattle)MTSS1L
SuperfamilyQ765P7
Human Protein AtlasENSG00000132613
Peptide AtlasQ765P7
HPRD14289
IPIIPI00783109   IPI00884952   IPI00479930   IPI00878797   IPI00980167   
Protein Interaction databases
DIP (DOE-UCLA)Q765P7
IntAct (EBI)Q765P7
FunCoupENSG00000132613
BioGRIDMTSS1L
STRING (EMBL)MTSS1L
ZODIACMTSS1L
Ontologies - Pathways
QuickGOQ765P7
Ontology : AmiGOruffle  actin monomer binding  phosphatidylinositol-4,5-bisphosphate binding  plasma membrane  plasma membrane organization  lamellipodium  cortical actin cytoskeleton  Rac GTPase binding  ruffle assembly  lamellipodium organization  
Ontology : EGO-EBIruffle  actin monomer binding  phosphatidylinositol-4,5-bisphosphate binding  plasma membrane  plasma membrane organization  lamellipodium  cortical actin cytoskeleton  Rac GTPase binding  ruffle assembly  lamellipodium organization  
NDEx NetworkMTSS1L
Atlas of Cancer Signalling NetworkMTSS1L
Wikipedia pathwaysMTSS1L
Orthology - Evolution
OrthoDB92154
GeneTree (enSembl)ENSG00000132613
Phylogenetic Trees/Animal Genes : TreeFamMTSS1L
HOVERGENQ765P7
HOGENOMQ765P7
Homologs : HomoloGeneMTSS1L
Homology/Alignments : Family Browser (UCSC)MTSS1L
Gene fusions - Rearrangements
Fusion : MitelmanMTSS1L/VAC14 [16q22.1/16q22.1]  
Fusion: TCGAMTSS1L 16q22.1 VAC14 16q22.1 LUSC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMTSS1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MTSS1L
dbVarMTSS1L
ClinVarMTSS1L
1000_GenomesMTSS1L 
Exome Variant ServerMTSS1L
ExAC (Exome Aggregation Consortium)MTSS1L (select the gene name)
Genetic variants : HAPMAP92154
Genomic Variants (DGV)MTSS1L [DGVbeta]
DECIPHERMTSS1L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMTSS1L 
Mutations
ICGC Data PortalMTSS1L 
TCGA Data PortalMTSS1L 
Broad Tumor PortalMTSS1L
OASIS PortalMTSS1L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMTSS1L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMTSS1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MTSS1L
DgiDB (Drug Gene Interaction Database)MTSS1L
DoCM (Curated mutations)MTSS1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MTSS1L (select a term)
intoGenMTSS1L
Cancer3DMTSS1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616951   
Orphanet
MedgenMTSS1L
Genetic Testing Registry MTSS1L
NextProtQ765P7 [Medical]
TSGene92154
GENETestsMTSS1L
Target ValidationMTSS1L
Huge Navigator MTSS1L [HugePedia]
snp3D : Map Gene to Disease92154
BioCentury BCIQMTSS1L
ClinGenMTSS1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD92154
Chemical/Pharm GKB GenePA164723215
Clinical trialMTSS1L
Miscellaneous
canSAR (ICR)MTSS1L (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMTSS1L
EVEXMTSS1L
GoPubMedMTSS1L
iHOPMTSS1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:20:52 CEST 2017

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