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MTTP (microsomal triglyceride transfer protein)

Identity

Other namesABL
MTP
HGNC (Hugo) MTTP
LocusID (NCBI) 4547
Atlas_Id 41449
Location 4q23
Location_base_pair Starts at 100485235 and ends at 100545154 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BCR (22q11.23) / MTTP (4q23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MTTP   7467
Cards
Entrez_Gene (NCBI)MTTP  4547  microsomal triglyceride transfer protein
GeneCards (Weizmann)MTTP
Ensembl hg19 (Hinxton)ENSG00000138823 [Gene_View]  chr4:100485235-100545154 [Contig_View]  MTTP [Vega]
Ensembl hg38 (Hinxton)ENSG00000138823 [Gene_View]  chr4:100485235-100545154 [Contig_View]  MTTP [Vega]
ICGC DataPortalENSG00000138823
TCGA cBioPortalMTTP
AceView (NCBI)MTTP
Genatlas (Paris)MTTP
WikiGenes4547
SOURCE (Princeton)MTTP
Genomic and cartography
GoldenPath hg19 (UCSC)MTTP  -     chr4:100485235-100545154 +  4q23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MTTP  -     4q23   [Description]    (hg38-Dec_2013)
EnsemblMTTP - 4q23 [CytoView hg19]  MTTP - 4q23 [CytoView hg38]
Mapping of homologs : NCBIMTTP [Mapview hg19]  MTTP [Mapview hg38]
OMIM157147   200100   605552   
Gene and transcription
Genbank (Entrez)AA609331 AI623321 AK225328 AK290793 AK302602
RefSeq transcript (Entrez)NM_000253 NM_001300785
RefSeq genomic (Entrez)NC_000004 NC_018915 NG_011469 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)MTTP
Cluster EST : UnigeneHs.195799 [ NCBI ]
CGAP (NCI)Hs.195799
Alternative Splicing GalleryENSG00000138823
Gene ExpressionMTTP [ NCBI-GEO ]   MTTP [ EBI - ARRAY_EXPRESS ]   MTTP [ SEEK ]   MTTP [ MEM ]
Gene Expression Viewer (FireBrowse)MTTP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4547
GTEX Portal (Tissue expression)MTTP
Protein : pattern, domain, 3D structure
UniProt/SwissProtP55157 (Uniprot)
NextProtP55157  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP55157
Splice isoforms : SwissVarP55157 (Swissvar)
PhosPhoSitePlusP55157
Domaine pattern : Prosite (Expaxy)VITELLOGENIN (PS51211)   
Domains : Interpro (EBI)Lipid_transp_b-sht_shell    Lipid_transpt_N    Vitellinogen_b-sht_N    Vitellinogen_superhlx   
Domain families : Pfam (Sanger)Vitellogenin_N (PF01347)   
Domain families : Pfam (NCBI)pfam01347   
Domain families : Smart (EMBL)LPD_N (SM00638)  
DMDM Disease mutations4547
Blocks (Seattle)MTTP
SuperfamilyP55157
Human Protein AtlasENSG00000138823
Peptide AtlasP55157
HPRD01144
IPIIPI00296645   IPI01011609   IPI00967313   IPI00441046   IPI00968150   IPI00967906   IPI00964771   IPI00963863   IPI00965537   IPI00967575   IPI00964117   
Protein Interaction databases
DIP (DOE-UCLA)P55157
IntAct (EBI)P55157
FunCoupENSG00000138823
BioGRIDMTTP
STRING (EMBL)MTTP
ZODIACMTTP
Ontologies - Pathways
QuickGOP55157
Ontology : AmiGOlipid transporter activity  lipid transporter activity  protein binding  phospholipid transporter activity  endoplasmic reticulum  endoplasmic reticulum lumen  lipid metabolic process  lipid binding  phospholipid transport  triglyceride transport  plasma lipoprotein particle assembly  lipoprotein biosynthetic process  receptor complex  protein heterodimerization activity  
Ontology : EGO-EBIlipid transporter activity  lipid transporter activity  protein binding  phospholipid transporter activity  endoplasmic reticulum  endoplasmic reticulum lumen  lipid metabolic process  lipid binding  phospholipid transport  triglyceride transport  plasma lipoprotein particle assembly  lipoprotein biosynthetic process  receptor complex  protein heterodimerization activity  
Pathways : KEGGFat digestion and absorption   
NDEx Network
Atlas of Cancer Signalling NetworkMTTP
Wikipedia pathwaysMTTP
Orthology - Evolution
OrthoDB4547
GeneTree (enSembl)ENSG00000138823
Phylogenetic Trees/Animal Genes : TreeFamMTTP
Homologs : HomoloGeneMTTP
Homology/Alignments : Family Browser (UCSC)MTTP
Gene fusions - Rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerMTTP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MTTP
dbVarMTTP
ClinVarMTTP
1000_GenomesMTTP 
Exome Variant ServerMTTP
ExAC (Exome Aggregation Consortium)MTTP (select the gene name)
Genetic variants : HAPMAP4547
Genomic Variants (DGV)MTTP [DGVbeta]
Mutations
ICGC Data PortalMTTP 
TCGA Data PortalMTTP 
Broad Tumor PortalMTTP
OASIS PortalMTTP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMTTP 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)MitoLSDB
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Mendelian genes
BioMutasearch MTTP
DgiDB (Drug Gene Interaction Database)MTTP
DoCM (Curated mutations)MTTP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MTTP (select a term)
intoGenMTTP
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)4:100485235-100545154  ENSG00000138823
CONAN: Copy Number AnalysisMTTP 
Mutations and Diseases : HGMDMTTP
OMIM157147    200100    605552   
MedgenMTTP
Genetic Testing Registry MTTP
NextProtP55157 [Medical]
TSGene4547
GENETestsMTTP
Huge Navigator MTTP [HugePedia]
snp3D : Map Gene to Disease4547
BioCentury BCIQMTTP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4547
Chemical/Pharm GKB GenePA164742099
Clinical trialMTTP
Miscellaneous
canSAR (ICR)MTTP (select the gene name)
Probes
Litterature
PubMed132 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMTTP
EVEXMTTP
GoPubMedMTTP
iHOPMTTP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Sun May 8 18:57:05 CEST 2016

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